GSE73885[Accession] - GEO DataSets - NCBI

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Comparative transcriptomics of the virulence regulons of enteropathogenic Escherichia coli from diverse phylogenomic lineages

(Submitter supplied) Global transcriptional analysis of eleven EPEC strains, including the most frequently studied strains used in laboratory studies investigating EPEC virulence mechanisms.

Organism:: Escherichia coli B171; Escherichia coli 100329; Escherichia coli 302053; Escherichia coli E110019; Escherichia coli C581_05; Escherichia coli 401140; Escherichia coli; Escherichia coli O127:H6 str. E2348/69; Escherichia coli 103385; Escherichia coli 300059; Escherichia coli 402290

Type:: Expression profiling by high throughput sequencing

11 related Platforms
44 Samples

Download data: TXT

Series

Accession:: GSE73885

ID:: 200073885

SRA Run Selector

Select item 1000210112.

Illumina HiSeq 2000 (Escherichia coli 300059)

Organism:: Escherichia coli 300059

1 Series
4 Samples

Platform

Accession:: GPL21011

ID:: 100021011

Select item 1000210103.

Illumina HiSeq 2000 (Escherichia coli 103385)

Organism:: Escherichia coli 103385

1 Series
4 Samples

Platform

Accession:: GPL21010

ID:: 100021010

Select item 1000210094.

Illumina HiSeq 2000 (Escherichia coli 100329)

Organism:: Escherichia coli 100329

1 Series
4 Samples

Platform

Accession:: GPL21009

ID:: 100021009

Select item 1000210085.

Illumina HiSeq 2000 (Escherichia coli 302053)

Organism:: Escherichia coli 302053

1 Series
4 Samples

Platform

Accession:: GPL21008

ID:: 100021008

Select item 1000210076.

Illumina HiSeq 2000 (Escherichia coli 402290)

Organism:: Escherichia coli 402290

3 Series
8 Samples

Platform

Accession:: GPL21007

ID:: 100021007

Select item 1000210067.

Illumina HiSeq 2000 (Escherichia coli 401140)

Organism:: Escherichia coli 401140

3 Series
12 Samples

Platform

Accession:: GPL21006

ID:: 100021006

Select item 1000210058.

Illumina HiSeq 2000 (Escherichia coli E110019)

Organism:: Escherichia coli E110019

1 Series
4 Samples

Platform

Accession:: GPL21005

ID:: 100021005

Select item 1000210049.

Illumina HiSeq 2000 (Escherichia coli C581_05)

Organism:: Escherichia coli C581_05

1 Series
4 Samples

Platform

Accession:: GPL21004

ID:: 100021004

Select item 10002100310.

Illumina HiSeq 2000 (Escherichia coli B171)

Organism:: Escherichia coli B171

1 Series
4 Samples

Platform

Accession:: GPL21003

ID:: 100021003

Select item 10002026211.

Illumina HiSeq 2000 (Escherichia coli O127:H6 str. E2348/69)

Organism:: Escherichia coli O127:H6 str. E2348/69

5 Series
27 Samples

Platform

Accession:: GPL20262

ID:: 100020262

Select item 10001454812.

Illumina HiSeq 2000 (Escherichia coli)

Organism:: Escherichia coli

84 Series
763 Samples

Platform

Accession:: GPL14548

ID:: 100014548

Select item 30190493813.

E2348_DMEM_0.5_BR2_2

Organism:: Escherichia coli O127:H6 str. E2348/69

Source name:: Escherichia coli cells

Platform:: GPL20262
Series:: GSE73885

Sample

Accession:: GSM1904938

ID:: 301904938

SRA Run Selector

Select item 30190493714.

E2348_DMEM_0.5_BR1_2

Organism:: Escherichia coli O127:H6 str. E2348/69

Source name:: Escherichia coli cells

Platform:: GPL20262
Series:: GSE73885

Sample

Accession:: GSM1904937

ID:: 301904937

SRA Run Selector

Select item 30190493615.

E2348_LB_0.5_BR2_2

Organism:: Escherichia coli O127:H6 str. E2348/69

Source name:: Escherichia coli cells

Platform:: GPL20262
Series:: GSE73885

Sample

Accession:: GSM1904936

ID:: 301904936

SRA Run Selector

Select item 30190493516.

E2348_LB_0.5_BR1_2

Organism:: Escherichia coli O127:H6 str. E2348/69

Source name:: Escherichia coli cells

Platform:: GPL20262
Series:: GSE73885

Sample

Accession:: GSM1904935

ID:: 301904935

SRA Run Selector

Select item 30190497417.

103385_TEPEC_DMEM_0.5_BR2

Organism:: Escherichia coli 103385

Source name:: Escherichia coli cells

Platform:: GPL21010
Series:: GSE73885

Sample

Accession:: GSM1904974

ID:: 301904974

SRA Run Selector

Select item 30190497318.

103385_TEPEC_DMEM_0.5_BR1

Organism:: Escherichia coli 103385

Source name:: Escherichia coli cells

Platform:: GPL21010
Series:: GSE73885

Sample

Accession:: GSM1904973

ID:: 301904973

SRA Run Selector

Select item 30190497219.

103385_TEPEC_LB_0.5_BR2

Organism:: Escherichia coli 103385

Source name:: Escherichia coli cells

Platform:: GPL21010
Series:: GSE73885

Sample

Accession:: GSM1904972

ID:: 301904972

SRA Run Selector

Select item 30190497120.

103385_TEPEC_LB_0.5_BR1

Organism:: Escherichia coli 103385

Source name:: Escherichia coli cells

Platform:: GPL21010
Series:: GSE73885

Sample

Accession:: GSM1904971

ID:: 301904971

SRA Run Selector

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