GSE93033[Accession] - GEO DataSets - NCBI

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Items: 4

Select item 2000930331.

Genome-wide maps of H3K27 state in transfected NIH3T3 cells.

(Submitter supplied) Epigenetic H3k27me3 changes of mouse NIH3T3 cells comparing control NIH3T3 cells transfected with a pEFm6-BRAF with cells transfected with pEFm6-BRAFV600E. By obtaining over 30 Million bases of sequence from chromatin immunoprecipitated DNA, we generated genome-wide chromatin-state maps of BRAF transfected. We find that global lysine 3 and lysine 27 trimethylation levels changed under the condition of activated ERK by BRAFV600E, and specific genes might be downregulated for the hight level of H3K27me3 induced by BRAFV600E

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL9185
2 Samples

Download data: BEDGRAPH

Series

Accession:: GSE93033

ID:: 200093033

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000091852.

Illumina Genome Analyzer (Mus musculus)

Organism:: Mus musculus

554 Series
3778 Samples

Platform

Accession:: GPL9185

ID:: 100009185

Select item 3024428203.

H3K27me3_ChIPSeq - mutant

Organism:: Mus musculus

Source name:: NIH3T3 cells

Platform:: GPL9185
Series:: GSE93033

Download data: BEDGRAPH

Sample

Accession:: GSM2442820

ID:: 302442820

SRA Run Selector

Select item 3024428194.

H3K27me3_ChIPSeq - wild type

Organism:: Mus musculus

Source name:: NIH3T3 cells

Platform:: GPL9185
Series:: GSE93033

Download data: BEDGRAPH

Sample

Accession:: GSM2442819

ID:: 302442819

SRA Run Selector

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