GSE95620[Accession] - GEO DataSets - NCBI

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Select item 2000956201.

During development, the Sku5 mutant roots engage different genes than wild type WS roots, either on the ground or in spaceflight.

(Submitter supplied) The wild type WS plants and the Sku5 mutant plants in the WS background were germinated on ISS or on the ground and the gene expression profiles in roots at 4 days or 8 days were established. The Sku5 gene (AT4G12420) codes for a multi-copper oxidase-like protein SKU5 protein that is involved in directed root tip growth. The Sku5 protein is glycosylated, GPI-anchored and localizes to the plasma membrane and the cell wall. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by high throughput sequencing

Platform:: GPL19580
32 Samples

Download data: XLSX

Series

Accession:: GSE95620

ID:: 200095620

SRA Run Selector

Select item 1000195802.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:: Arabidopsis thaliana

400 Series
9124 Samples

Platform

Accession:: GPL19580

ID:: 100019580

Select item 3025193313.

Spaceflight, 8 days old, Wassilewskija Rep4

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519331

ID:: 302519331

SRA Run Selector

Select item 3025193304.

Spaceflight, 8 days old, Wassilewskija Rep3

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519330

ID:: 302519330

SRA Run Selector

Select item 3025193295.

Spaceflight, 8 days old, Wassilewskija Rep2

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519329

ID:: 302519329

SRA Run Selector

Select item 3025193286.

Spaceflight, 8 days old, Wassilewskija Rep1

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519328

ID:: 302519328

SRA Run Selector

Select item 3025193277.

Ground Control, 8 days old, Wassilewskija Rep4

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519327

ID:: 302519327

SRA Run Selector

Select item 3025193268.

Ground Control, 8 days old, Wassilewskija Rep3

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519326

ID:: 302519326

SRA Run Selector

Select item 3025193259.

Ground Control, 8 days old, Wassilewskija Rep2

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519325

ID:: 302519325

SRA Run Selector

Select item 30251932410.

Ground Control, 8 days old, Wassilewskija Rep1

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519324

ID:: 302519324

SRA Run Selector

Select item 30251932311.

Spaceflight, 8 days old, Sku5 Rep4

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519323

ID:: 302519323

SRA Run Selector

Select item 30251932212.

Spaceflight, 8 days old, Sku5 Rep3

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519322

ID:: 302519322

SRA Run Selector

Select item 30251932113.

Spaceflight, 8 days old, Sku5 Rep2

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519321

ID:: 302519321

SRA Run Selector

Select item 30251932014.

Spaceflight, 8 days old, Sku5 Rep1

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519320

ID:: 302519320

SRA Run Selector

Select item 30251931915.

Ground Control, 8 days old, Sku5 Rep4

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519319

ID:: 302519319

SRA Run Selector

Select item 30251931816.

Ground Control, 8 days old, Sku5 Rep3

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519318

ID:: 302519318

SRA Run Selector

Select item 30251931717.

Ground Control, 8 days old, Sku5 Rep2

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519317

ID:: 302519317

SRA Run Selector

Select item 30251931618.

Ground Control, 8 days old, Sku5 Rep1

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown on the ground, 8 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519316

ID:: 302519316

SRA Run Selector

Select item 30251931519.

Spaceflight, 4 days old, Wassilewskija Rep4

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 4 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519315

ID:: 302519315

SRA Run Selector

Select item 30251931420.

Spaceflight, 4 days old, Wassilewskija Rep3

Organism:: Arabidopsis thaliana

Source name:: solid 0.5x MS media plates; grown in spaceflight, 4 days old plant harvested into KFT containing RNAlater fixative

Platform:: GPL19580
Series:: GSE95620

Sample

Accession:: GSM2519314

ID:: 302519314

SRA Run Selector

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