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Items: 1 to 20 of 29

1.

Whole-genome tiling array analysis in normal human bronchial/tracheal epithelial cells (NHBE)

(Submitter supplied) Identify transcriptionally-active regions (TARs) greater than 400 nt long across the entire human genome. A total of 578 were identified in NHBE cells. We then focused on those TARs originating from non-coding sequence and that displayed a moderate to high degree of sequence conservation. A subset of 15 non-coding transcripts were then further examined to determine if they are altered in cancer (deregulated expression in breast and ovarian cancer and sequenced for mutations in a panel of cancer samples). more...
Organism:
Homo sapiens
Type:
Expression profiling by array; Expression profiling by genome tiling array
14 related Platforms
14 Samples
Download data: BAR, CEL, TXT
Series
Accession:
GSE9655
ID:
200009655

PubMed Similar studies

2.

[Hs35b_M14R] Affymetrix Human Tiling 1.0R Set, Array 14

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6169
ID:
100006169

3.

[Hs35b_M13R] Affymetrix Human Tiling 1.0R Set, Array 13

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6168
ID:
100006168

4.

[Hs35b_M12R] Affymetrix Human Tiling 1.0R Set, Array 12

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6167
ID:
100006167

5.

[Hs35b_M11R] Affymetrix Human Tiling 1.0R Set, Array 11

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6166
ID:
100006166

6.

[Hs35b_M10R] Affymetrix Human Tiling 1.0R Set, Array 10

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6165
ID:
100006165

7.

[Hs35b_M09R] Affymetrix Human Tiling 1.0R Set, Array 9

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6164
ID:
100006164

8.

[Hs35b_M08R] Affymetrix Human Tiling 1.0R Set, Array 8

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6163
ID:
100006163

9.

[Hs35b_M07R] Affymetrix Human Tiling 1.0R Set, Array 7

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6162
ID:
100006162

10.

[Hs35b_M06R] Affymetrix Human Tiling 1.0R Set, Array 6

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6161
ID:
100006161

11.

[Hs35b_M05R] Affymetrix Human Tiling 1.0R Set, Array 5

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6160
ID:
100006160

12.

[Hs35b_M04R] Affymetrix Human Tiling 1.0R Set, Array 4

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6159
ID:
100006159

13.

[Hs35b_M03R] Affymetrix Human Tiling 1.0R Set, Array 3

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6158
ID:
100006158

14.

[Hs35b_M02R] Affymetrix Human Tiling 1.0R Set, Array 2

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6157
ID:
100006157

15.

[Hs35b_M01R] Affymetrix Human Tiling 1.0R Set, Array 1

(Submitter supplied) Tiling array submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html The GeneChip® Human Tiling 1.0R Array Set is designed for transcript mapping experiments. This 14-array set contains approximately 45 million oligonucleotide probes to interrogate the human genome. Each array in the set contains over 3.25 million Perfect Match/Mismatch probe pairs to specifically interrogate genomic regions. more...
Organism:
Homo sapiens
50 Series
57 Samples
Download data
Platform
Accession:
GPL6156
ID:
100006156

16.

NHBE_Chip 14 rep1_rep2_rep3

Organism:
Homo sapiens
Source name:
normal human bronchial/tracheal epithelial cells
Platform:
GPL6169
Series:
GSE9655
Download data: BAR, CEL, TXT
Sample
Accession:
GSM244086
ID:
300244086

17.

NHBE_Chip 12 rep1_rep2_rep3

Organism:
Homo sapiens
Source name:
normal human bronchial/tracheal epithelial cells
Platform:
GPL6167
Series:
GSE9655
Download data: BAR, CEL, TXT
Sample
Accession:
GSM244084
ID:
300244084

18.

NHBE_Chip 07 rep1_rep2_rep3

Organism:
Homo sapiens
Source name:
normal human bronchial/tracheal epithelial cells
Platform:
GPL6162
Series:
GSE9655
Download data: BAR, CEL, TXT
Sample
Accession:
GSM244079
ID:
300244079

19.

NHBE_Chip 05 rep1_rep2_rep3

Organism:
Homo sapiens
Source name:
normal human bronchial/tracheal epithelial cells
Platform:
GPL6160
Series:
GSE9655
Download data: BAR, CEL, TXT
Sample
Accession:
GSM244077
ID:
300244077

20.

NHBE_Chip 11 rep1_rep2_rep3

Organism:
Homo sapiens
Source name:
normal human bronchial/tracheal epithelial cells
Platform:
GPL6166
Series:
GSE9655
Download data: BAR, CEL, TXT
Sample
Accession:
GSM244083
ID:
300244083

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