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Items: 4

1.

Comprehensive performance comparison of high-resolution array platforms for genome-wide Copy Number Variation (CNV) analysis in humans [IlluminaHumanOmni2.5]

(Submitter supplied) Background High-resolution microarray technology is routinely used in basic research and clinical practice to efficiently detect copy number variants (CNVs) across the entire human genome. A new generation of arrays combining high probe densities with optimized designs will comprise essential tools for genome analysis in the coming years. We systematically compared the genome-wide CNV detection power of all 17 available array designs from the Affymetrix, Agilent, and Illumina platforms by hybridizing the well-characterized genome of 1000 Genomes Project subject NA12878 to all arrays, and performing data analysis using both manufacturer-recommended and platform-independent software. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array
Platform:
GPL20641
2 Samples
Download data: IDAT, TXT
Series
Accession:
GSE96810
ID:
200096810

PubMed Full text in PMC Similar studies

2.

Illumina HumanOmni2.5M-8v1-1_B [data table]

(Submitter supplied) Illumina HumanOmni25M-8v1-1_B Protocol: see Illumina web site
Organism:
Homo sapiens
9 Series
612 Samples
Download data: BPM, CSV
Platform
Accession:
GPL20641
ID:
100020641

3.

NA12878 Genomic DNA Replicate 2 (IlluminaHumanOmni2.5)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL20641
Series:
GSE96810 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2544441
ID:
302544441

4.

NA12878 Genomic DNA Replicate 1 (IlluminaHumanOmni2.5)

Organism:
Homo sapiens
Source name:
Blood, B Lymphocyte
Platform:
GPL20641
Series:
GSE96810 GSE96909
Download data: IDAT, TXT
Sample
Accession:
GSM2544440
ID:
302544440

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db=gds|term=GSE96810[Accession]|query=1|qty=2|blobid=MCID_667461b4ccfbad768f85762d|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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