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Items: 1 to 20 of 22

1.

Nucleosome Positioning by an Evolutionarily Conserved Chromatin Remodeler Prevents Aberrant DNA Methylation in Neurospora.

(Submitter supplied) Aberrant DNA methylation is often associated with cancers and DNA-demethylating agents such as 5-azacytidine (5-azaC) are often used for anti-tumor therapy. Although it is clinically effective at inhibiting DNA methylation, the mechanistic effect that 5-azaC elicits on eukaryotic cells is controversial. It has been proposed that incorporation of 5-azaC into DNA during replication irreversibly tethers cytosine methyltransferases (MTases) to DNA. more...
Organism:
Neurospora crassa
Type:
Expression profiling by high throughput sequencing; Genome variation profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Non-coding RNA profiling by high throughput sequencing
Platforms:
GPL16164 GPL20660
19 Samples
Download data: FASTA, IGV, TDF, TXT, VCF, WIG
Series
Accession:
GSE98911
ID:
200098911
2.

Illumina NextSeq 500 (Neurospora crassa)

Organism:
Neurospora crassa
20 Series
314 Samples
Download data
Platform
Accession:
GPL20660
ID:
100020660
3.

Illumina HiSeq 2000 (Neurospora crassa)

Organism:
Neurospora crassa
46 Series
419 Samples
Download data
Platform
Accession:
GPL16164
ID:
100016164
4.

N3752_WT_BSseq

Organism:
Neurospora crassa
Source name:
N3752 WT Ncrassa (Selker)
Platform:
GPL16164
Series:
GSE98911
Download data: WIG
Sample
Accession:
GSM5077387
ID:
305077387
5.

N1072_dim1-wg-seq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL16164
Series:
GSE98911
Download data: VCF
Sample
Accession:
GSM2627479
ID:
302627479
6.

N654microA_dim1-wg-seq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL16164
Series:
GSE98911
Download data: VCF
Sample
Accession:
GSM2627478
ID:
302627478
7.

N654het_dim1-wg-seq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL16164
Series:
GSE98911
Download data: VCF
Sample
Accession:
GSM2627477
ID:
302627477
8.

TAG_N200-parental-wg-seq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL16164
Series:
GSE98911
Download data: FASTA
Sample
Accession:
GSM2627476
ID:
302627476
9.

N5496_delta-dim1_Bisulfite

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL16164
Series:
GSE98911
Download data: IGV
Sample
Accession:
GSM2627469
ID:
302627469
10.

N1634_dim1_bisulfite

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL16164
Series:
GSE98911
Download data: IGV
Sample
Accession:
GSM2627468
ID:
302627468
11.

dim1_N5801_H3K9me3_ChIPseq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20660
Series:
GSE98911
Download data: TDF
Sample
Accession:
GSM2790224
ID:
302790224
12.

WT_N150_H3K9me3_ChIPseq

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20660
Series:
GSE98911
Download data: TDF
Sample
Accession:
GSM2790223
ID:
302790223
13.

N5801_dim1-2_polyA_RNA

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20660
Series:
GSE98911
Download data: TXT
Sample
Accession:
GSM2627475
ID:
302627475
14.

N5801_dim1-1_polyA_RNA

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20660
Series:
GSE98911
Download data: TXT
Sample
Accession:
GSM2627474
ID:
302627474
15.

N5801_dim1_H3K27me2me3

Organism:
Neurospora crassa
Source name:
germinated conidia
Platform:
GPL20660
Series:
GSE98911
Download data: TDF
Sample
Accession:
GSM2627471
ID:
302627471
16.

N5801_delta-dim1_H3K9me3

Organism:
Neurospora crassa
Source name:
germinated condia
Platform:
GPL20660
Series:
GSE98911
Download data: TDF
Sample
Accession:
GSM2627470
ID:
302627470
17.

N5801-dim1_all_MNase

Organism:
Neurospora crassa
Source name:
nuclei from germinated condia
Platform:
GPL20660
Series:
GSE98911
Download data: WIG
Sample
Accession:
GSM2627467
ID:
302627467
18.

N5801-dim1-2_MNase

Organism:
Neurospora crassa
Source name:
nuclei from germinated condia
Platform:
GPL20660
Series:
GSE98911
Download data: WIG
Sample
Accession:
GSM2627466
ID:
302627466
19.

N5801-dim1-1_MNase

Organism:
Neurospora crassa
Source name:
nuclei from germinated condia
Platform:
GPL20660
Series:
GSE98911
Download data: WIG
Sample
Accession:
GSM2627465
ID:
302627465
20.

N3752-WT_all_MNase

Organism:
Neurospora crassa
Source name:
nuclei from germinated condia
Platform:
GPL20660
Series:
GSE98911
Download data: WIG
Sample
Accession:
GSM2627464
ID:
302627464
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Supplemental Content

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