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Items: 4

1.

Conservation of mouse-human trans-regulatory circuitry despite high cis-regulatory divergence

(Submitter supplied) The basic body plan and major physiological axes have been highly conserved during mammalian evolution, yet only a small fraction of the human genome sequence appears to be subject to evolutionary constraint. To quantify cis- versus trans-acting contributions to mammalian regulatory evolution, we performed genomic DNase I footprinting of the mouse genome across 25 cell and tissue types, collectively defining ~8.6 million transcription factor (TF) occupancy sites at nucleotide resolution. more...
Organism:
Mus musculus; Homo sapiens
Type:
Other
6 related Platforms
32 Samples
Download data: BAM, BED, BIGWIG, BROADPEAK, NARROWPEAK, TXT, WIG
Series
Accession:
GSE51341
ID:
200051341

PubMed Full text in PMC Similar studies

2.

DNaseI Digital Genomic Footprinting from ENCODE/University of Washington [Mouse]

(Submitter supplied) This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Richard Sandstrom mailto:sull@u.washington.edu). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:genome@soe.ucsc.edu). This track, produced as part of the mouse ENCODE Project, contains deep sequencing DNase data that will be used to identify sites where regulatory factors bind to the genome (footprints). more...
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL9250 GPL13112
22 Samples
Download data: BIGWIG, BROADPEAK, NARROWPEAK
Series
Accession:
GSE40869
ID:
200040869

Mouse ENCODESRA Run Selector

3.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8329 Series
188424 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

4.

UW_DnaseDgf_T-Naive_adult-8wks

Organism:
Mus musculus
Source name:
T-Naive
Platform:
GPL13112
Series:
GSE40869 GSE51341
Download data: BIGWIG, BROADPEAK, NARROWPEAK
Sample
Accession:
GSM1003825
ID:
301003825

SRA Run Selector

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db=gds|term=GSM1003825[Accession]|query=9|qty=3|blobid=MCID_67103befc7d3ca20d576d88f|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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  • GSM1003825[Accession] (4)
    GEO DataSets
  • Prionurus laticlavius zinc finger protein of the cerebellum 1 (zic1) gene, parti...
    Prionurus laticlavius zinc finger protein of the cerebellum 1 (zic1) gene, partial cds
    gi|478213473|gb|KC623930.1|
    Nucleotide
  • Anthroposophy
    Anthroposophy
    Knowledge of the nature of man. A spiritual and mystical doctrine that grew out of theosophy and derives mainly from the philosophy of Rudolph Steiner, Austrian social philoso...<br/>Year introduced: 1967(1963)
    MeSH
  • Hinduism
    Hinduism
    A complex body of social, cultural, and religious beliefs and practices evolved in and largely confined to the Indian subcontinent and marked by a caste system, an outlook ten...<br/>Year introduced: 1995
    MeSH
  • Religion and Medicine
    Religion and Medicine
    The interrelationship of medicine and religion.<br/>
    MeSH

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