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Items: 3

1.

CGH analyses for the Chinese indigenous pig breeds and commercial pig breeds

(Submitter supplied) Since CNVs play a vital role in genomic studies, it is an imperative need to develop a comprehensive, more accurate and higher resolution porcine CNV map with practical significance in follow-up CNV functional analyses To detect CNV of pigs, we performed high density aCGH data of diverse pig breeds in the framework of the pig draft genome sequence (Sscrofa10.2)
Organism:
Sus scrofa
Type:
Genome variation profiling by genome tiling array
Platform:
GPL17150
12 Samples
Download data: PAIR
Series
Accession:
GSE46847
ID:
200046847
2.

NimbleGen Sus scrofa 2.1M CGH array [120529_Sscr_10_2_WG_JH_CGH_HX1]

(Submitter supplied) Annotation in this record based on NCBI Sscrofa 10.2 2.1M probes in total Protocol: see manufacturer's web site www.nimblegen.com
Organism:
Sus scrofa
1 Series
12 Samples
Download data: GFF, NDF, POS, TXT
Platform
Accession:
GPL17150
ID:
100017150
3.

MS8_Meishan pig

Organism:
Sus scrofa
Source name:
[test] ear tissue (channel 1) [reference] ear tissue (channel 2)
Platform:
GPL17150
Series:
GSE46847
Download data: PAIR
Sample
Accession:
GSM1139107
ID:
301139107
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