GSM1322887[Accession] - GEO DataSets

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Items: 4

Select item 2000547281.

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Arabidopsis lyrata; Arabidopsis thaliana; Arabis alpina

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platforms:: GPL16940 GPL11221 GPL18238
30 Samples

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Accession:: GSE54728

ID:: 200054728

Select item 2000547272.

Genome-wide profiling of H3K4me3, H3K27me3 H3K27me1 and 5mC enrichment and mRNA levels in young leaves of Arabidopsis lyrata

(Submitter supplied) Chromatin, DNA and RNA were extracted from young A. alpina Pajares primary stem leaves. Chromatin and DNA methylation immunoprecipitation experiments were performed using commercially available antibodies and analyzed by Illumina sequencing (ChIP-seq and MeDIP-seq). Transcriptome data were generated by RNA-seq.

Organism:: Arabidopsis lyrata

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing