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Items: 4

1.

Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Escherichia coli; Escherichia coli str. K-12 substr. MG1655
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platforms:
GPL16085 GPL17439
16 Samples
Download data: GFF
Series
Accession:
GSE66482
ID:
200066482
2.

Decoding genome-wide GadEWX transcriptional regulatory networks reveals a multifaceted cellular response to acid stress in Escherichia coli [ChIP-seq]

(Submitter supplied) The response to acid stress is a fundamental process in bacteria. Three transcription factors, GadE, GadW, and GadX (GadEWX) are known to play a critical role in the transcriptional regulation of glutamate-dependent acid resistance (GDAR) system in Escherichia coli K-12 MG1655. However, the regulatory role of GadEWX in coordinating interacting cellular functions is still unknown. Here, we comprehensively reconstruct genome-wide GadEWX transcriptional regulatory network in E. more...
Organism:
Escherichia coli str. K-12 substr. MG1655
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL17439
8 Samples
Download data: GFF
Series
Accession:
GSE66441
ID:
200066441
3.

Illumina MiSeq (Escherichia coli str. K-12 substr. MG1655)

Organism:
Escherichia coli str. K-12 substr. MG1655
43 Series
238 Samples
Download data
Platform
Accession:
GPL17439
ID:
100017439
4.

ChIP-exo RpoS pH5.5 1

Organism:
Escherichia coli str. K-12 substr. MG1655
Source name:
Immunoprecipitated DNA
Platform:
GPL17439
Series:
GSE66441 GSE66482
Download data: GFF
Sample
Accession:
GSM1633277
ID:
301633277
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Supplemental Content

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