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Items: 5

1.

changes of global gene expression in E. coli during an oxygen shift

(Submitter supplied) The purpose of this study is to investigate the changes of global gene expression in E. coli during an oxygen shift. All cultures were grown under aerobic or anaerobic conditions in M9 minimal media supplemented with glucose. Samples were RNA-stabilized using Qiagen RNAProtect Bacterial Reagent, and total RNA was isolated from exponentially growing cells using a Qiagen RNeasy mini kit (protocols available at www1.qiagen.com). more...
Organism:
Escherichia coli; Escherichia coli K-12
Type:
Expression profiling by array
Dataset:
GDS680
Platform:
GPL199
43 Samples
Download data: CEL
Series
Accession:
GSE1121
ID:
200001121

PubMed Similar studies Analyze with GEO2R

2.

anaerobic knock-out

(Submitter supplied) Six different knock-out strains' expression data under anaerobic condition Keywords: parallel sample
Organism:
Escherichia coli; Escherichia coli K-12
Type:
Expression profiling by array
Platform:
GPL199
22 Samples
Download data: CEL
Series
Accession:
GSE1107
ID:
200001107

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.
Full record GDS680

Oxygen deprivation expression profiling of various mutants

Examination of K-12 MG1655 deletion strains grown in either aerobic or anaerobic conditions. Strains deleted for transcriptional regulators in oxygen response. Results used to validate a computational model of transcriptional and metabolic networks.
Organism:
Escherichia coli; Escherichia coli K-12
Type:
Expression profiling by array, count, 7 genotype/variation, 2 growth protocol, 2 strain sets
Platform:
GPL199
Series:
GSE1121
43 Samples
Download data: CEL
DataSet
Accession:
GDS680
ID:
680

PubMed Similar studies GEO Profiles Analyze DataSet

4.

[Ecoli_ASv2] Affymetrix E. coli Antisense Genome Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html Has 7312 entries and was indexed 20-May-2002. The GeneChip E. coli Antisense Genome Array can be used for examining expression of all known E. coli genes and discovering novel, uncharacterized intergenic transcripts. The array contains probe sets to detect the antisense strand of more than 4,200 known open reading frames. more...
Organism:
Escherichia coli K-12
6 DataSets
54 Series
1 Related Platform
947 Samples
Download data
Platform
Accession:
GPL199
ID:
100000199

5.

anaerobic_arcA_rep1

Organism:
Escherichia coli
Source name:
anaerobic growth of arcA knock-out strain on M9 media with glucose
Platform:
GPL199
Series:
GSE1107 GSE1121
Dataset:
GDS680
Download data: CEL
Sample
Accession:
GSM18271
ID:
300018271

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