GEO DataSets

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Pseudomonas; Pseudomonas putida; Pseudomonas putida KT2440

Type:

Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array

Platforms:

GPL8296 GPL6591

18 Samples

Download data: BAR, CEL

(Submitter supplied) MvaT proteins are recognized as a member of H-NS family proteins in pseudomonads. IncP-7 conjugative plasmid pCAR1, which was originally found in Pseudomonas resinovorans, carries an mvaT homologous gene, pmr. In Pseudomonas putida KT2440 bearing pCAR1, it was previously reported that pmr and chromosomally-encoded homologous genes, turA and turB, are majorly transcribed, and that Pmr interacts with TurA and TurB in vitro (Yun et al. more...

Organism:

Pseudomonas putida KT2440; Pseudomonas putida

Type:

Expression profiling by genome tiling array; Genome binding/occupancy profiling by genome tiling array

Platform:

GPL8296

9 Samples

Download data: BAR, CEL

(Submitter supplied) This is an Affymetrix custom-commercial tiling array that covers thePseudomonas putida KT2440 chromosome (RefSeq: NC_002947) at 11-bp density. BPMAP files are provided as supplementary files. KT2440b520511FF-3.bpmap represents the forward strand of KT2440 chromosome, and KT2440b520511FR-3.bpmap represents the reverse strand of KT2440 chromosome. Protocol: See manufacturer's web site.

Organism:

Pseudomonas putida KT2440

11 Series

74 Samples

Download data: BPMAP