GSM205861[Accession] - GEO DataSets

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Items: 3

Select item 2000082981.

Natural variation in RPS2-mediated resistance: correlating gene-expression profiles to phenotypic responses.

(Submitter supplied) Natural variation within plant species is an important resource for discovery of genes controlling biological traits. Gene-expression profiling of natural variation is increasingly used to identify genes affecting a trait. Here, we explored variation among Arabidopsis thaliana accessions with respect to defense against Pseudomonas syringae pv. tomato DC3000 (Pst), with a focus on R-gene mediated resistance triggered by the Pst type III effector protein AvrRpt2. more...

Organism:: Arabidopsis thaliana

Type:: Expression profiling by array

Platform:: GPL3638
54 Samples

Download data: GPR

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Accession:: GSE8298

ID:: 200008298

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000036382.

The miniarray (Arabidopsis Pathoarray) 464_001

(Submitter supplied) This set includes 576 oligonucleotides, 50 to 70-mers, consisting of 464 Arabidopsis pathogen-responsive and 107 Arabidopsis normalization genes and 5 arbitrary spiked-controls. Each feature contains 0.9mg/ml of oligonucleotide above and 0.25mg/ml of calibration oligonucleotide. Protocol: The arrays were printed in the Stanford Functional Genomics Facility with custom built microarrayers. Oligonucleotides were printed with a 200μm pitch onto Corning UltraGAPS slides at a concentration of 50 μM in Pront! Universal Spotting Solution. more...