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GEO DataSets

Functional Genomics Studies

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Items: 4

Select item 2000981231.

The Epstein-Barr virus episome maneuvers between nuclear chromatin compartments during reactivation

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Homo sapiens; Human papillomavirus 16; human papillomavirus 31; human gammaherpesvirus 4; Human gammaherpesvirus 8

Type:: Other; Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing

6 related Platforms
46 Samples

Download data: TXT, WIG

Series

Accession:: GSE98123

ID:: 200098123

PubMed Full text in PMC Similar studies

Select item 2000981202.

The Epstein-Barr virus episome maneuvers between nuclear chromatin compartments during reactivation [HiC-seq]

(Submitter supplied) Using chromatin conformation capture methods, we learned that the latent episome of the human Epstein-Barr virus (EBV) displays preferential chromosome association that correlates with gene density. The episome avoids gene-rich chromosomes and favors gene-poor chromosomes. Kaposi’s sarcoma-associated herpesvirus behaves similarly, but human papillomavirus does not, suggesting limited evolutionary conservation of this strategy. more...

Organism:: Human gammaherpesvirus 8; human gammaherpesvirus 4; human papillomavirus 31; Homo sapiens; Human papillomavirus 16

Type:: Other

6 related Platforms
32 Samples

Download data: TXT

Series

Accession:: GSE98120

ID:: 200098120

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 1000167913.

Illumina HiSeq 2500 (Homo sapiens)

Organism:: Homo sapiens

12191 Series
349325 Samples

Platform

Accession:: GPL16791

ID:: 100016791

Select item 3025875044.

K562_pD stable HiC rep 2

Organism:: Homo sapiens

Source name:: K562_pD stable HiC

Platform:: GPL16791
Series:: GSE98120 GSE98123

Download data: TXT

Sample

Accession:: GSM2587504

ID:: 302587504

SRA Run Selector

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GSM2587504[Accession] (4)
GEO DataSets
2020306[uid] (1)
Taxonomy
Uncultured Green Bay ferromanganous micronodule bacterium MNA5 16S ribosomal RNA...
Uncultured Green Bay ferromanganous micronodule bacterium MNA5 16S ribosomal RNA gene, partial sequence
gi|11093933|gb|AF293005.1|

Nucleotide
Primary amenorrhea
Primary amenorrhea

MedGen
C0232939[conceptid] (1)
MedGen

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