GSM2948951[Accession] - GEO DataSets

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Items: 4

Select item 2001097121.

Retinal Cell Type Epigenetic Memory Predicts Reprogramming Efficiency and Retinogenesis in 3D Organoid Cultures [ChIP-seq_Mm]

(Submitter supplied) Diverse cell types can be reprogrammed into pluripotent stem cells by ectopic expression of Oct4 (Pou5f1), Klf4, Sox3 and Myc. Many of these induced pluripotent stem cells (iPSCs) retain an epigenetic memory of their cellular origins and this in turn may bias their subsequent differentiation. Differentiated neurons are difficult to reprogram and there has not been a systematic side-by-side characterization of reprogramming efficiency or epigenetic memory across different neuronal subtypes. more...

Organism:: Mus musculus

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL13112
332 Samples

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Accession:: GSE109712

ID:: 200109712

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000870642.

The Dynamic Epigenetic Landscape of the Retina During Development, Reprogramming, and Tumorigenesis

(Submitter supplied) Check Web Link for HMMs(11 States) for Retina hg19 and mm9 https://pecan.stjude.cloud/proteinpaint/study/retina_hic_2018

Organism:: Mus musculus; Homo sapiens

Type:: Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing; Other