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Items: 3

1.

Screening for copy-number alterations and LOH in CLL - a comparative study of four microarray platforms

(Submitter supplied) Screening for gene copy-number alterations (CNAs) has improved by applying genome-wide microarrays, where SNP arrays also allow analysis of loss of heterozygozity (LOH). We here analyzed 10 chronic lymphocytic leukemia (CLL) samples using four different high-resolution platforms: BAC arrays (32K), oligonucleotide arrays (185K, Agilent), and two SNP arrays (250K, Affymetrix and 317K, Illumina). Cross-platform comparison revealed 29 concordantly detected CNAs, including known recurrent alterations, which confirmed that all platforms are powerful tools when screening for large aberrations. more...
Organism:
Homo sapiens
Type:
Genome variation profiling by SNP array; Genome variation profiling by genome tiling array
4 related Platforms
40 Samples
Download data: CEL, CHP, GPR, TXT
Series
Accession:
GSE13557
ID:
200013557
2.

Illumina HumanHap300-Duov2 Genotyping BeadChip (HumanHap300v2_A)

(Submitter supplied) over 318,000 tag SNPs derived from Phase I HapMap data Protocol: See manufacturer's website
Organism:
Homo sapiens
7 Series
1 Related Platform
312 Samples
Download data: CSV
Platform
Accession:
GPL6980
ID:
100006980
3.

4_Illumina

Organism:
Homo sapiens
Source name:
Blood
Platform:
GPL6980
Series:
GSE13557
Download data
Sample
Accession:
GSM322220
ID:
300322220
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