GSM3243110[Accession] - GEO DataSets

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Items: 4

Select item 2001166521.

Exoribonucleases coordinate degradation and expression of mRNAs in Escherichia coli at the stationary phase

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Escherichia coli str. K-12 substr. MG1655; Escherichia coli K-12

Type:: Expression profiling by array

Platform:: GPL14649
44 Samples

Download data: PAIR

Series

Accession:: GSE116652

ID:: 200116652

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 2001165762.

Exoribonucleases coordinate degradation and expression of mRNAs in Escherichia coli at the stationary phase [stabilome]

(Submitter supplied) Exoribonucleases are crucial for RNA degradation in Escherichia coli but the roles of RNase R and PNPase and their potential overlap in stationary phase are not well characterized. Here, we used a genome-wide approach to determine how RNase R and PNPase affect the mRNA half-lives compared to wild type (stabilome) in the stationary phase. The stabilome is an original dynamic transcriptome-based analysis to measure the rates of mRNA degradation at the genome scale. more...

Organism:: Escherichia coli K-12; Escherichia coli str. K-12 substr. MG1655

Type:: Expression profiling by array

Platform:: GPL14649
35 Samples

Download data: PAIR

Series

Accession:: GSE116576

ID:: 200116576

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000146493.

NimbleGen E. coli K12 Gene Expression Array [071112_Ecoli_K12_EXP]

(Submitter supplied) NimbleGen design name 071112 Ecoli K12 EXP X4, NimbleGen Catalog No. A6697-00-01. A 4x72K expression design for 4,254 genes from Escherichia coli K12 with eight 60-mer probe pairs (PM/MM) per gene. Each probe is replicated 2 times. The design includes random GC and other control probes. Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.