GSM349011[Accession] - GEO DataSets

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Items: 3

Select item 2000138681.

Genome-wide analysis of maltose utilization and regulation in aspergilla

(Submitter supplied) Comparative genomics and transcriptomics of the filamentous fungi Aspergillus oryzae and Aspergillus niger have opened possibilities for investigating the cellular metabolism and regulation of these fungi on a systemic level. The aim of this work was to understand how metabolism is regulated and to identify common regulatory responses between A. oryzae and A. niger. We therefore conducted batch fermentations with A. more...

Organism:: Aspergillus niger; Aspergillus oryzae; Aspergillus nidulans

Type:: Expression profiling by array

Platform:: GPL5975
18 Samples

Download data: CEL

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Accession:: GSE13868

ID:: 200013868

Select item 1000059752.

[AsprgDTUa520520F] Custom Affymetrix Aspergillus Chip DTU_3Aspergillus_45K_v1.0

(Submitter supplied) Type: CustomExpress. Feature size: 11-micron. Format: 49-7875 Protocol: Initial probe-design was done using the OligoWiz 2.0 software (Nielsen, 2003, Wernersson, 2005) from CDS sequences of predicted ORFs from the genome sequences of A. nidulans FGSC A4 (Galagan, 2005), A. niger ATCC 1015 (Baker, 2006) and A. oryzae RIB40 (Machida, 2005). For each gene, a maximum of 11 non-overlapping perfect match probes were calculated using the OligoWiz standard scoring of cross-hybridization, melting temperature, folding, position preference and low complexity. more...