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Items: 3

1.

Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA

(Submitter supplied) The spatial and temporal regulation of transcription initiation is pivotal for controlling gene expression. Here, we introduce capped-small RNA-seq (csRNA-seq), which uses total RNA as starting material to detect transcription start sites (TSS) of both stable and unstable RNAs at single-nucleotide resolution. csRNA-seq is highly sensitive to acute changes in transcription and identifies an order of magnitude more regulated transcripts than RNA-seq. more...
Organism:
Oryza sativa; Homo sapiens; Mus musculus; Neurospora crassa; Capsaspora owczarzaki; Nematostella vectensis
Type:
Other
10 related Platforms
40 Samples
Download data: BIGWIG, BW, TXT
Series
Accession:
GSE135498
ID:
200135498
2.

Illumina HiSeq 4000 (Oryza sativa)

Organism:
Oryza sativa
50 Series
575 Samples
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Platform
Accession:
GPL23013
ID:
100023013
3.

Rice total RNA-seq

Organism:
Oryza sativa
Source name:
rice leaves
Platform:
GPL23013
Series:
GSE135498
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Sample
Accession:
GSM4012757
ID:
304012757
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db=gds|term=GSM4012757[Accession]|query=1|qty=7|blobid=MCID_66605accbb845b085b64e985|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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