GSM4232054[Accession] - GEO DataSets

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Items: 4

Select item 2001425701.

Integrative analysis of reference epigenomes in rice

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:: Oryza sativa

Type:: Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platform:: GPL24468
513 Samples

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Series

Accession:: GSE142570

ID:: 200142570

PubMed Full text in PMC Similar studies

Select item 2001425682.

Integrative analysis of reference epigenomes in rice [BiSulfite-seq]

(Submitter supplied) Approximately 73% of rice genomes were annotated with different epigenomic properties. Refinement of promoter regions using open chromatin and H3K4me3-marked regions provided insight into transcriptional regulation. Active and repressed histone modifications and the predicted enhancers varied largely across tissues, whereas inactive chromatin states were relatively stable. Further, we investigated the impact of genetic variants on epigenomic signals and gene expression. more...