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Items: 4

1.

LFY is pioneer transcription factor [MNase-seq]

(Submitter supplied) This study identified LEAFY (LFY) as a pioneer transcription factor. We made use of 35S:LFY-GR, an inducible version of the LFY protein fused to the rat glucocorticoid hormone binding domain. In root explants, steroid activated LFY-GR triggers synchronous and abundant flower induction (PMID: 15225291). We combined LFY ChIP-seq, MNase-seq before and after LFY binding and time-course RNA-seq in 35S:LFY-GR root explants to characterize the role of LFY as a pioneer transcription factor.
Organism:
Arabidopsis thaliana
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19580
8 Samples
Download data: BED, BIGWIG, BW
Series
Accession:
GSE141705
ID:
200141705
2.

LFY is pioneer transcription factor

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Arabidopsis thaliana
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL19580
29 Samples
Download data: BIGWIG, BW, TXT
Series
Accession:
GSE141706
ID:
200141706
3.

Illumina NextSeq 500 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
400 Series
9124 Samples
Download data
Platform
Accession:
GPL19580
ID:
100019580
4.

1hrDex_HighDigest_2 MNase-seq

Organism:
Arabidopsis thaliana
Source name:
callus on CIM for 5 days with dex treatment
Platform:
GPL19580
Series:
GSE141705 GSE141706
Download data: BW
Sample
Accession:
GSM4962687
ID:
304962687
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Supplemental Content

db=gds|term=GSM4962687[Accession]|query=11|qty=2|blobid=MCID_6733b2083ec0a11b44792d64|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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