GSM498638[Accession] - GEO DataSets

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Items: 3

Select item 2000199521.

Expression data from batch cultivations of Aspergillus niger wild type and adrA, facB and creA deletion mutants

(Submitter supplied) Expression data from batch cultivations of Aspergillus niger wild type strain ATCC 1015 and adrA, facB and creA deletion mutants constructed on ATCC 1015 background strain with glucose or glycerol as carbon sources. Genome-wide transcriptome analysis was used to identify genes either affected directly or indirectly by each transcription factor investigated during growth on a repressing or a derepressing carbon source. more...

Organism:: Aspergillus niger; Aspergillus nidulans; Aspergillus oryzae

Type:: Expression profiling by array

Platform:: GPL5975
36 Samples

Download data: CEL

Series

Accession:: GSE19952

ID:: 200019952

Analyze with GEO2R

Select item 1000059752.

[AsprgDTUa520520F] Custom Affymetrix Aspergillus Chip DTU_3Aspergillus_45K_v1.0

(Submitter supplied) Type: CustomExpress. Feature size: 11-micron. Format: 49-7875 Protocol: Initial probe-design was done using the OligoWiz 2.0 software (Nielsen, 2003, Wernersson, 2005) from CDS sequences of predicted ORFs from the genome sequences of A. nidulans FGSC A4 (Galagan, 2005), A. niger ATCC 1015 (Baker, 2006) and A. oryzae RIB40 (Machida, 2005). For each gene, a maximum of 11 non-overlapping perfect match probes were calculated using the OligoWiz standard scoring of cross-hybridization, melting temperature, folding, position preference and low complexity. more...