GSM614468[Accession] - GEO DataSets

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Items: 4

Select item 2000250111.

Study for evaluating the effect of cold ischemic time and RNA stabilization method on RNA integrity and gene expression measurements

(Submitter supplied) Time series of eleven breast cancer samples subjected to different cold ischemic stress of up to 3 hr post tumor excision. A different 2x2 factorial within this study evaluated the effect of stabilization method (RNAlater vs snap freezing) and stablization delay (0 and 40 min) at room temperature.

Organism:: Homo sapiens

Type:: Expression profiling by array

Dataset:: GDS4088
Platform:: GPL96
86 Samples

Download data: CEL

Series

Accession:: GSE25011

ID:: 200025011

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 40882.

Variable breast cancer tumor sample collection methods

Analysis of breast tumor samples preserved using 2 different RNA stabilization methods (RNAlater or snap freezing) up to 3 hours post tumor excision. Results provide insight into the effects of tissue handling on RNA integrity and microarray measurements from resected breast cancers.

Organism:: Homo sapiens

Type:: Expression profiling by array, transformed count, 11 individual, 35 other, 2 protocol, 6 time sets

Platform:: GPL96
Series:: GSE25011
86 Samples

Download data: CEL

DataSet

Accession:: GDS4088

ID:: 4088

PubMed Full text in PMC Similar studies GEO Profiles Analyze DataSet

Select item 1000000963.

[HG-U133A] Affymetrix Human Genome U133A Array

(Submitter supplied) Affymetrix submissions are typically submitted to GEO using the GEOarchive method described at http://www.ncbi.nlm.nih.gov/projects/geo/info/geo_affy.html June 03, 2009: annotation table updated with netaffx build 28 June 08, 2012: annotation table updated with netaffx build 32 June 24, 2016: annotation table updated with netaffx build 35 Protocol: see manufacturer's web site The U133 set includes 2 arrays with a total of 44928 entries and was indexed 29-Jan-2002. more...