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Items: 4

1.

Integrated mapping of the dog epigenome

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Canis lupus familiaris
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing; Methylation profiling by high throughput sequencing
Platforms:
GPL24229 GPL20988 GPL25760
186 Samples
Download data: BW
Series
Accession:
GSE203107
ID:
200203107

PubMed Full text in PMC Similar studies

2.

Integrated mapping of the dog epigenome (ChIP-seq)

(Submitter supplied) Dogs have become a valuable model in exploring multifaceted diseases and biology relevant to human health. Despite large-scale dog genome projects producing high-quality draft references, a comprehensive annotation of functional elements is still lacking. We addressed this through integrative next-generation sequencing of transcriptomes paired with five histone marks and DNA methylome profiling across 11 tissue types, deciphering the dog’s epigenetic code by defining distinct chromatin states, super-enhancer and methylome landscapes, and thus showed that these regions are associated with a wide range of biological functions and cell/tissue identity. more...
Organism:
Canis lupus familiaris
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL20988 GPL25760
131 Samples
Download data
Series
Accession:
GSE203104
ID:
200203104

PubMed Full text in PMC Similar studies

3.

Illumina HiSeq 2500 (Canis lupus familiaris)

Organism:
Canis lupus familiaris
39 Series
810 Samples
Download data
Platform
Accession:
GPL20988
ID:
100020988

4.

ChIP_k4me3_ST_jj8

Organism:
Canis lupus familiaris
Source name:
Stomach
Platform:
GPL20988
Series:
GSE203104 GSE203107
Download data
Sample
Accession:
GSM6156752
ID:
306156752

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db=gds|term=GSM6156752[Accession]|query=7|qty=2|blobid=MCID_673917c9c743ad79f7314c59|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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