GSM628748[Accession] - GEO DataSets

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Items: 3

Select item 2000256011.

Novel gene discovery in up to 10 ETEC strains and production of species microarray. Discovery of conserved and unique ETEC genes by comparative genome hybridization studies.

(Submitter supplied) PFGRC has developed a cost effective alternative to complete genome sequencing in order to study the genetic differences between closely related species and/or strains. The comparative genomics approach combines Gene Discovery (GD) and Comparative Genomic Hybridization (CGH) techniques, resulting in the design and production of species microarrays that represent the diversity of a species beyond just the sequenced reference strain(s) used in the initial microarray design. more...

Organism:: Escherichia coli

Type:: Genome variation profiling by array

Platform:: GPL10979
216 Samples

Download data: TXT

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Accession:: GSE25601

ID:: 200025601

Analyze with GEO2R

Select item 1000109792.

Agilent-029784 ETEC_CGH

(Submitter supplied) ETEC CGH Microarray. Oligos designed for conserved regions. Arrays of this design have barcodes that begin with 16029784 or 2529784.. Orientation:. Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.. The ID column represents the Agilent Feature Extraction feature number.. more...