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Items: 3

1.

An improved terminal ribose-modified small RNA sequencing (TRM-sRNA-seq) reveals novel features of miRNA modification and identifies HEN1-independent 2’-O-modified sRNAs derived from tRNAs

(Submitter supplied) Concomitant cloning of RNA degradation products is a major issue in standard small RNA-sequencing practices. It not only adds complexity in bona fide sRNA characterization, but also affects experimental replicability and sometimes results in library construction failure. Given that all kinds of canonical plant small RNAs bearing the 3’ end 2’-O-methylation modification, we here developed an sRNA-seq method (named terminal ribose-modified sRNA sequencing, TRM-sRNA-seq).
Organism:
Oryza sativa; Arabidopsis thaliana; Solanum lycopersicum; Zea mays
Type:
Non-coding RNA profiling by high throughput sequencing
4 related Platforms
54 Samples
Download data: TXT
Series
Accession:
GSE244009
ID:
200244009

PubMed Full text in PMC Similar studies

2.

Illumina NovaSeq 6000 (Arabidopsis thaliana)

Organism:
Arabidopsis thaliana
500 Series
9141 Samples
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Platform
Accession:
GPL26208
ID:
100026208

3.

hen1-2_ inflorescence_sRNA-seq(PBA+OX)_Rep1

Organism:
Arabidopsis thaliana
Source name:
inflorescence
Platform:
GPL26208
Series:
GSE244009
Download data: TXT
Sample
Accession:
GSM7804779
ID:
307804779

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db=gds|term=GSM7804779[Accession]|query=8|qty=5|blobid=MCID_67142546c7d3ca20d5686f46|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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