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Items: 5

1.

Dynamic shifts in occupancy by TAL1 are guided by GATA factors and drive large-scale reprogramming of gene expression during hematopoiesis

(Submitter supplied) We used mouse ENCODE data along with complementary data from other laboratories to study the dynamics of occupancy and the role in gene regulation of the transcription factor TAL1, a critical regulator of hematopoiesis, at multiple stages of hematopoietic differentiation. We combined ChIP-seq and RNA-seq data in six mouse cell types representing a progression from multilineage precursors to differentiated erythroblasts and megakaryocytes. more...
Organism:
Mus musculus
Type:
Other
4 related Platforms
81 Samples
Download data: BEDGRAPH, BIGWIG, BROADPEAK, TXT, WIG
Series
Accession:
GSE51338
ID:
200051338

PubMed Full text in PMC Similar studies

2.

A comparative encyclopedia of DNA elements in the mouse genome

(Submitter supplied) The laboratory mouse shares the majority of its protein-coding genes with humans, making it the premier model organism in biomedical research, yet the two mammals differ in significant ways. To gain greater insights into both shared and species-specific transcriptional and cellular regulatory programs in the mouse, the Mouse ENCODE Consortium has mapped transcription, DNase I hypersensitivity, transcription factor binding, chromatin modifications and replication domains throughout the mouse genome in diverse cell and tissue types. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome variation profiling by genome tiling array; Genome binding/occupancy profiling by high throughput sequencing
8 related Platforms
588 Samples
Download data: BAM, BEDRNAELEMENTS, BIGWIG, BROADPEAK, NARROWPEAK, PAIR
Series
Accession:
GSE49847
ID:
200049847

PubMed Full text in PMC Similar studies Analyze with GEO2R

3.

ENCODE PSU Hardison RnaSeq

(Submitter supplied) This data was generated by ENCODE. If you have questions about the data, contact the submitting laboratory directly (Ross Hardison mailto:rch8@psu.edu). If you have questions about the Genome Browser track associated with this data, contact ENCODE (mailto:genome@soe.ucsc.edu). Knowledge of the function of genomic DNA sequences comes from three basic approaches. Genetics uses changes in behavior or structure of a cell or organism in response to changes in DNA sequence to infer function of the altered sequence. more...
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platforms:
GPL13112 GPL11002
17 Samples
Download data: BIGWIG
Series
Accession:
GSE40522
ID:
200040522

Mouse ENCODESRA Run Selector

4.

Illumina HiSeq 2000 (Mus musculus)

Organism:
Mus musculus
8346 Series
188700 Samples
Download data
Platform
Accession:
GPL13112
ID:
100013112

5.

PSU_RnaSeq_G1E-ER4_diffProtD_7hr_paired-end (superseded by GSE90212)

Organism:
Mus musculus
Source name:
G1E-ER4
Platform:
GPL13112
Series:
GSE40522 GSE49847 GSE51338
Download data: BIGWIG
Sample
Accession:
GSM995531
ID:
300995531

SRA Run Selector

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