GEO DataSets

(Submitter supplied) Study of the relation between the activation of the inflammation in the encephalic death donor and the quality of the graft (time before the first rejection occurred). Diagnostic approach based on the profiling of the donor's inflammatory reaction. Keywords: procalcitonin, graft, inflammation

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL1947

88 Samples

Download data: GPR, TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platforms:

GPL6955 GPL6968

85 Samples

Download data: TXT

(Submitter supplied) We performed miRNA microarray profiling on samples prepared from two different cell lines by three widely-used total RNA sample prep methods.

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platform:

GPL6968

42 Samples

Download data: TXT

(Submitter supplied) We measured the expression of 470 human miRNAs in nine human tissues using Agilent DNA microarrays.

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platform:

GPL6955

43 Samples

Download data: TXT

(Submitter supplied) A microarray containing oligonucleotide probes complimentary to published miRNAs was constructed. These probes consisted of all the non-redundant miRNA sequences from the miRNA registry (Release 8.2). The arrays were spotted in-house on Corning® epoxide coated slides; Probes were spotted in duplicate and additionally two full arrays were printed per slide. The probes were in sense orientation relative to the mature miRNAs and thus complimentary to either the cDNA or aRNA that would be derived from the mature miRNAs. more...

Organism:

Mus musculus

2 Series

17 Samples

Download data

(Submitter supplied) A microarray containing oligonucleotide probes complimentary to 557 miRNAs was constructed. These probes consisted of all the non-redundant miRNA sequences from the miRNA registry (Release 5.0). The arrays were spotted in-house on Corning® epoxide coated slides; Probes were spotted in duplicate and additionally two full arrays were printed per slide. The probes were in sense orientation relative to the mature miRNAs and thus complimentary to either the cDNA or aRNA that would be derived from the mature miRNAs. more...

Organism:

Mus musculus

2 Series

12 Samples

Download data

(Submitter supplied) mRNA used for the analysis of these microarrays were previously analyzed for 34 genes by reverse transcription - polymerase chain reaction in Desai BJ et al., J.Orthop.Trauma 17: 689-698, 2003. These two data sets were subsequently studied to compare the results from these two different methods for mRNA quantitation. The comparison was publised in "Comparison of mRNA gene expression by RT-PCR and DNA microarray" by W. more...

Organism:

Rattus norvegicus

Type:

Expression profiling by array

Platform:

GPL85

10 Samples

Download data: CEL

(Submitter supplied) Background: With lower manufacturing cost, high spot density, and flexible probe design, genomic tiling microarrays are ideal for comprehensive transcriptome studies. Typically, transcriptome profiling using microarrays involves reverse transcription, which converts RNA to cDNA. The cDNA is then labeled and hybridized to the probes on the arrays, thus the RNA signals are detected indirectly. Reverse transcription is known to generate artifactual cDNA, in particular the synthesis of second-strand cDNA, leading to false discovery of antisense RNA. more...

Organism:

Porphyromonas gingivalis; Porphyromonas gingivalis W83

Type:

Expression profiling by genome tiling array

Platform:

GPL11291

18 Samples

Download data: PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Saccharomyces cerevisiae; Neurospora crassa

Type:

Expression profiling by array

Platforms:

GPL10682 GPL10640

14 Samples

Download data: GPR

(Submitter supplied) Multi-targeting priming (MTP) for genome-wide gene expression assays provides selective targeting of multiple sequences and counter-selection against undesirable sequences. We demonstrated superior performance of two MTPs compared to oligo-dT microarray profling and RNA tag sequencing the response of Saccharomyces cerevisiae to nitrogen deficiency and profiling Neurospora crassa early sexual development. more...

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL10682

4 Samples

Download data: GPR

(Submitter supplied) Multi-targeting priming (MTP) for genome-wide gene expression assays provides selective targeting of multiple sequences and counter-selection against undesirable sequences. We demonstrated superior performance of two MTPs compared to oligo-dT microarray profling and RNA tag sequencing the response of Saccharomyces cerevisiae to nitrogen deficiency and profiling Neurospora crassa early sexual development. more...

Organism:

Neurospora crassa

Type:

Expression profiling by array

Platform:

GPL10640

3 Samples

Download data: GPR

(Submitter supplied) Multi-targeting priming (MTP) for genome-wide gene expression assays provides selective targeting of multiple sequences and counter-selection against undesirable sequences. We demonstrated superior performance of two MTPs compared to oligo-dT microarray profling and RNA tag sequencing the response of Saccharomyces cerevisiae to nitrogen deficiency and profiling Neurospora crassa early sexual development. more...

Organism:

Saccharomyces cerevisiae

Type:

Expression profiling by array

Platform:

GPL10682

4 Samples

Download data: GPR

(Submitter supplied) Multi-targeting priming (MTP) for genome-wide gene expression assays provides selective targeting of multiple sequences and counter-selection against undesirable sequences. We demonstrated superior performance of two MTPs compared to oligo-dT microarray profling and RNA tag sequencing the response of Saccharomyces cerevisiae to nitrogen deficiency and profiling Neurospora crassa early sexual development. more...

Organism:

Neurospora crassa

Type:

Expression profiling by array

Platform:

GPL10640

3 Samples

Download data: GPR