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Links from GEO DataSets

Items: 20

1.

Dm_y[1]cn[1] bw[1] sp[1]_pupa_WhitePrePupaep1day_TotalRNA_p200_338-340-342_38bp

(Submitter supplied) modENCODE_submission_545 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array; Non-coding RNA profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, WIG
Series
Accession:
GSE16330
ID:
200016330

PubMed Full text in PMC Similar studies modENCODE

2.

mRNA-Seq of whole flies from Drosophila

(Submitter supplied) We sequenced mRNA from whole flies of females and male of Drosophila melanogaster, D. simulans, D. yakuba, D. ananassae, D. pseudobscura, D. mojavensis, and D. virilis as part of the modENCODE project to validate novel gene models found in D. melanogaster, identify genes differentially expressed between the sexes and sex-specific alternative splicing events, and examine the evolution of gene expression.
Organism:
Drosophila melanogaster; Drosophila pseudoobscura; Drosophila mojavensis; Drosophila virilis; Drosophila ananassae; Drosophila simulans; Drosophila yakuba
Type:
Expression profiling by high throughput sequencing
14 related Platforms
32 Samples
Download data: BAM, RPKM, TXT
Series
Accession:
GSE28078
ID:
200028078

PubMed Full text in PMC Similar studies modENCODESRA Run Selector

3.

Dm_y[1]cn[1] bw[1] sp[1]_adult_Male_30dayPostEclosion_TotalRNA_p200_392-394-396_38bp

(Submitter supplied) modENCODE_submission_2897 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23235
ID:
200023235

PubMed Full text in PMC Similar studies modENCODE

4.

Dm_y[1]cn[1] bw[1] sp[1]_adult_Female_30dayPostEclosion_TotalRNA_p200_398-400-402_38bp

(Submitter supplied) modENCODE_submission_2896 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23234
ID:
200023234

PubMed Full text in PMC Similar studies modENCODE

5.

Dm_4dFVirginHead_TotalRNA_515_516_38bp

(Submitter supplied) modENCODE_submission_2342 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
2 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23233
ID:
200023233

PubMed Full text in PMC Similar studies modENCODE

6.

Dm_1dFVirginHead_TotalRNA_497_498_38bp

(Submitter supplied) modENCODE_submission_2341 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
2 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23232
ID:
200023232

PubMed Full text in PMC Similar studies modENCODE

7.

Dm_4dFMatedOvary_TotalRNA_531_532_38bp

(Submitter supplied) modENCODE_submission_2340 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
2 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23231
ID:
200023231

PubMed Full text in PMC Similar studies modENCODE

8.

Dm_y[1]cn[1] bw[1] sp[1]_embryo_6-8h_TotalRNA_p200_230-232_38bp

(Submitter supplied) modENCODE_submission_763 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
2 Samples
Download data: GFF, GR
Series
Accession:
GSE23230
ID:
200023230

PubMed Full text in PMC Similar studies modENCODE

9.

Dm_S2-DRSC_polyApRNA_p200_479-480-481_38bp

(Submitter supplied) modENCODE_submission_718 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23229
ID:
200023229

PubMed Full text in PMC Similar studies modENCODE

10.

Dm_C1.8_polyApRNA_p200_491_492_492_38bp

(Submitter supplied) modENCODE_submission_717 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23228
ID:
200023228

PubMed Full text in PMC Similar studies modENCODE

11.

Dm_Bg3-c2_nuclearRNA_p200_488_489_490_38bp

(Submitter supplied) modENCODE_submission_716 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23227
ID:
200023227

PubMed Full text in PMC Similar studies modENCODE

12.

Dm_S2-DRSC_nuclearRNA_p200_482-483-484_38bp

(Submitter supplied) modENCODE_submission_715 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23226
ID:
200023226

PubMed Full text in PMC Similar studies modENCODE

13.

Dm_ML_BG3-c2_polyApRNA_p200_485-486-487_38bp

(Submitter supplied) modENCODE_submission_713 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23225
ID:
200023225

PubMed Full text in PMC Similar studies modENCODE

14.

Dm_y[1]cn[1] bw[1] sp[1]_prepupa_WhitePrePupap12h_TotalRNA_p200_332-334-336_38bp

(Submitter supplied) modENCODE_submission_544 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23224
ID:
200023224

PubMed Full text in PMC Similar studies modENCODE

15.

Dm_y[1]cn[1] bw[1] sp[1]_pupa_WhitePrePupaep2days_TotalRNA_p200_344-346-348_38bp

(Submitter supplied) modENCODE_submission_541 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: GFF, GR
Series
Accession:
GSE23223
ID:
200023223

PubMed Full text in PMC Similar studies modENCODE

16.

Dm_y[1]cn[1] bw[1] sp[1]_larval_L3-gut_stage2_TotalRNA_p200_444-446-450_38bp

(Submitter supplied) modENCODE_submission_540 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23222
ID:
200023222

PubMed Full text in PMC Similar studies modENCODE

17.

Dm_y[1]cn[1] bw[1] sp[1]_larval_L3-gut-stage3_TotalRNA_p200_452-454-456_38bp

(Submitter supplied) modENCODE_submission_539 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23221
ID:
200023221

PubMed Full text in PMC Similar studies modENCODE

18.

Dm_y[1]cn[1] bw[1] sp[1]_larval_L3-12hrPostMolt_TotalRNA_p200_296-298-300_38bp

(Submitter supplied) modENCODE_submission_538 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, GFF, GR
Series
Accession:
GSE23220
ID:
200023220

PubMed Full text in PMC Similar studies modENCODE

19.

Dm_y[1]cn[1] bw[1] sp[1]_embryo_4-6h_poly-Ap_p200_409-410-411_38bp

(Submitter supplied) modENCODE_submission_121 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: GFF, GR
Series
Accession:
GSE23219
ID:
200023219

PubMed Full text in PMC Similar studies modENCODE

20.

Dm_y[1]cn[1] bw[1] sp[1]_pupa_WhitePrePupaep4day_TotalRNA_p200_356-358-360_38bp

(Submitter supplied) modENCODE_submission_543 This submission comes from a modENCODE project of Susan Celniker. For full list of modENCODE projects, see http://www.genome.gov/26524648 Project Goal: We will generate over 600 RNA samples in biological triplicate and use them to generate expression profile maps detailing the sites of transcription across the fly genome using whole genome tiling arrays at 38 bp resolution as a broad survey of the transcriptome and 7 bp arrays resolution to identify at high resolution transcripts ends, splice sites, and small RNAs. more...
Organism:
Drosophila melanogaster
Type:
Expression profiling by genome tiling array; Non-coding RNA profiling by genome tiling array
Platform:
GPL6629
3 Samples
Download data: CEL, WIG
Series
Accession:
GSE16329
ID:
200016329

PubMed Full text in PMC Similar studies modENCODE

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