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Links from GEO DataSets

Items: 9

1.

Gene expression profiling of MIAPaCa2 cells re-expressing the alpha2 integrin or truncation mutations of alpha2 integrin

(Submitter supplied) Previous reports demonstrate that the α2-integrin (α2) mediates pancreatic ductal adenocarcinoma (PDAC) cell interaction with collagens. We found that untransformed pancreatic ductal epithelial cells and well-differentiated PDAC cells use α2 exclusively to adhere and migrate on collagenI. In contrast, poorly-differentiated PT45P1 and MIAPaCa2 cells demonstrate reduced reliance on, or complete loss of α2, respectively. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
5 Samples
Download data: CEL
Series
Accession:
GSE18277
ID:
200018277
2.

Gene expression comparison of drug-resistant Panc1/mock cells and Panc1 cells expressing wildtype syk

(Submitter supplied) We recently identified the nonreceptor tyrosine kinase syk as a tumor suppressor in pancreatic ductal adenocarcinoma cells. Reintroduction of syk into Panc1 cells promoted a more differentiated phenotype and retarded invasion and tumorigenic growth. Gene array analysis identified over 2,000 transcripts differentially expressed at FDR<0.01. Among these were members of the MMP2 axis, which were subsequently shown to regulate Panc1 invasion. more...
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
2 Samples
Download data: CEL
Series
Accession:
GSE18000
ID:
200018000
3.

Transcriptome analysis of pancreatic tumor cell invasion and angiogenesis in the PDAC-CAM model

(Submitter supplied) Human pancreatic adenocarcinoma cells were grafted on the chick chorioallantoic membrane (CAM). Human and chicken GeneChips were used simultaneously to study gene regulation during PDAC cell invasion.
Organism:
Gallus gallus; Homo sapiens
Type:
Expression profiling by array
Platforms:
GPL570 GPL3213
4 Samples
Download data: CEL, CHP
Series
Accession:
GSE14509
ID:
200014509
4.

Effect of KLK5 knockdown and PRSS3 knockdown in PC9 lung cancer cells

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL570
12 Samples
Download data: CEL
Series
Accession:
GSE112785
ID:
200112785
5.

Global mRNA/LncRNA expression analysis of pancreatic tumors causing type3C Diabetes Mellitus

(Submitter supplied) Pancreatic tumors with small size can cause type3C Diabetes Mellitus (PCA-DM) but the mechanism is unknown. In this study we aimed at revealing the mRNA and long noncoding RNA (LncRNA) expression patterns of pancreatic tumors that triggered PCA-DM. Four pancreatic tumors from patients with PCA-DM (A1-A4), four pancreatic tumors from patients without PCA-DM (B1-B4), and four pancreatic tissues from patients with pancreatitis were individually profiled with Agilent microarrays(Arraystar Human LncRNA Array v3.0).
Organism:
Homo sapiens
Type:
Expression profiling by array; Non-coding RNA profiling by array
Platform:
GPL16956
12 Samples
Download data: TXT
Series
Accession:
GSE61166
ID:
200061166
6.

Differentially expressed genes after miRNA or siRNA transfection in human cancer cell lines (A-498, 786-O, A549, TE-8, PANC-1, SW1990, PC3 and PC3M)

(Submitter supplied) To identify differentially expressed genes by anti cancer treatments (microRNAs or siRNAs) in human cancer, several cell lines ( renal cell carcinoma, lung adenocarcinoma, esophageal, pancreatic and prostate cancer) were subjected to Agilent whole genome microarrays.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL20844
16 Samples
Download data: TXT
Series
Accession:
GSE93290
ID:
200093290
7.

Whole-Tissue Gene Expression Study of Pancreatic Ductal Adenocarcinoma

(Submitter supplied) Expression analysis of 36 pancreatic ductal adenocarcinoma tumors and matching normal pancreatic tissue samples from pancreatic cancer patients of the Clinical Institute Fundeni (ICF) using Affymetrix U133 Plus 2.0 whole-genome chips.
Organism:
Homo sapiens
Type:
Expression profiling by array
Dataset:
GDS4103
Platform:
GPL570
78 Samples
Download data: CEL
Series
Accession:
GSE15471
ID:
200015471
8.
Full record GDS4103

ICF cohort: Whole-tissue pancreatic ductal adenocarcinoma

Analysis of pancreatic ductal adenocarcinoma (PDAC) tumors and matching normal pancreatic tissue from ICF pancreatic cancer patients. PDAC is an aggressive, rapidly disseminating, desmoplastic cancer with poor prognosis. Results provide insight into molecular processes involved in PDAC pathology.
Organism:
Homo sapiens
Type:
Expression profiling by array, transformed count, 36 individual, 2 tissue sets
Platform:
GPL570
Series:
GSE15471
78 Samples
Download data: CEL
9.

Prognostic relevance of molecular subtypes and master regulators in pancreatic ductal adenocarcinoma

(Submitter supplied) To evaluate the prognostic relevance of molecular subtypes and key transcription factors in pancreatic ductal adenocarcinoma (PDAC), we performed gene expression analysis of whole-tumor tissue obtained from 118 surgically resected PDAC and 13 control samples.
Organism:
Homo sapiens
Type:
Expression profiling by array
Platform:
GPL13667
131 Samples
Download data: CEL
Series
Accession:
GSE62165
ID:
200062165
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