Similar studies for GEO DataSets (Select 200171125) - GEO DataSets

Select item 2001711251.

Analysis of the Chlamydomonas mitochondrial ribosome RNA content

(Submitter supplied) The goal of this analysis was to identify the ribosomal RNA content of the mitochondrial risome of Chlamydomonas reinhardtii green alga

Organism:: Chlamydomonas reinhardtii

Type:: Other; Expression profiling by high throughput sequencing

Platform:: GPL18983
2 Samples

Download data: BW

Series

Accession:: GSE171125

ID:: 200171125

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Select item 2001196552.

Small is big in Arabidopsis mitochondrial ribosome

(Submitter supplied) Mitochondria are responsible for energy production through aerobic respiration and represent the powerhouse of eukaryotic cells. Their metabolism and gene expression processes combine bacterial-like features and traits that evolved in eukaryotes. Among mitochondrial gene expression processes, translation remains the most elusive. In plants, while numerous pentatricopeptide repeat (PPR) proteins are involved in all steps of gene expression, their function in translation remains unclear. more...

Organism:: Arabidopsis thaliana

Type:: Other

Platform:: GPL19580
4 Samples

Download data: XLSX

Series

Accession:: GSE119655

ID:: 200119655

PubMed Similar studies SRA Run Selector

Select item 2001166883.

MTG1-RNA IP

(Submitter supplied) We report the interaction of MTG1 with mitochondrial RNAs.

Organism:: Homo sapiens

Type:: Other

Platform:: GPL18573
4 Samples

Download data: BEDGRAPH

Series

Accession:: GSE116688

ID:: 200116688

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Select item 2001349604.

YBEY is an essential biogenesis factor for mitochondrial ribosomes

(Submitter supplied) Ribosome biogenesis relies on a number of specific factors. Some of them are remarkably conserved, suggesting that they play essential roles even in distant evolutionary contexts. This is namely the case for the UPF0054 protein YBEY found in all bacteria, but also in many Eukarya. Proposed to act as an endoribonuclease processing the 3’ end of 16S rRNA, YBEY is critically required for translation in model bacteria and plant chloroplasts. more...

Organism:: Homo sapiens

Type:: Expression profiling by high throughput sequencing

Platform:: GPL16791
6 Samples

Download data: TXT

Series

Accession:: GSE134960

ID:: 200134960

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Select item 2000953515.

Application of next generation sequencing approaches to assess effects of PDE12 knockout on the mitochondrial transcriptome

(Submitter supplied) Approach 1, RNAseq: Knockout of the mitochondrial poly(A) specific exoribonuclease PDE12 led to a severe defect in mitochondrial translation. We aimed to assess the effects of the absence of PDE12 on the differential expression or aberrant accumulation of mitochondrial mRNA transcripts or anti-sense RNAs. We performed RNA-seq of mitochondrial-enriched RNA from PDE12+/+ and PDE12-/- cell lines, in triplicate using Illumina MiSeq following library generation using TruSeq Stranded Total RNA library prep kit. more...