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Links from GEO DataSets

Items: 6

1.

Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [I]

(Submitter supplied) RNA-seq was undertaken in rats with or without myocardial ischemia-reperfusion injury to derive a list of signaling pathways and differentially expressed genes
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL18694
6 Samples
Download data: TXT
Series
Accession:
GSE225245
ID:
200225245
2.

Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [III]

(Submitter supplied) H2Aub Chip-seq was undertaken in rats with myocardial ischemia injury to derive a list of signaling pathways and genes
Organism:
Rattus norvegicus
Type:
Genome binding/occupancy profiling by high throughput sequencing
Platform:
GPL25947
2 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE225538
ID:
200225538
3.

Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL25947 GPL18694
14 Samples
Download data: BW, NARROWPEAK
Series
Accession:
GSE225371
ID:
200225371
4.

Further inhibition of Histone H2A ubiquitination protects myocardium against ischemia/reperfusion injury through enhancing glycolysis and improving mitochondrial function via promoting Hsp27 expression [II]

(Submitter supplied) RNA-seq was undertaken in rats with or without myocardial ischemia injury to derive a list of signaling pathways and differentially expressed genes
Organism:
Rattus norvegicus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL25947
6 Samples
Download data: TXT
Series
Accession:
GSE225368
ID:
200225368
5.

Role of remodeling and spacing factor 1 in histone H2A ubiquitination mediated gene silencing

(Submitter supplied) Posttranslational modification of histones plays important roles in regulating chromatin-based nuclear processes. Histone H2A ubiquitination (H2Aub) is a prevalent modification and has been primarily linked to gene silencing; however, the mechanism by which H2Aub represses gene expression remains largely unclear. Here we report the identification of RSF1 (remodeling and spacing factor 1), a subunit of the RSF (remodeling and spacing factor) complex, as a novel H2Aub binding protein which mediates the repressive function of H2Aub on gene expression. more...
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL20301 GPL9250 GPL21103
13 Samples
Download data: TXT, WIG
Series
Accession:
GSE93090
ID:
200093090
6.

Investigation of Rsf1 genomic distribution and effect on gene expression

(Submitter supplied) We report the effect of Rsf1 knockdown or deletion on gene expression in human and mouse cells. We also report the genomic distribution of Rsf1 in mouse embryonic stem cells and nucleosome positioning in wild type and RSF1 knockout mouse ESC.
Organism:
Homo sapiens; Mus musculus
Type:
Expression profiling by high throughput sequencing; Genome binding/occupancy profiling by high throughput sequencing
Platforms:
GPL17021 GPL16791
11 Samples
Download data: BEDGRAPH, TXT
Series
Accession:
GSE83360
ID:
200083360
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Supplemental Content

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