GEO DataSets

Expression profiling of normal and cancerous cervix tissue samples at stages 1B, 2A, 2B and 3B.

Organism:

Homo sapiens

Type:

Expression profiling by array, count, 5 disease state sets

Platform:

GPL355

Series:

GSE527

32 Samples

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(Submitter supplied) Expression profiles in normal and cancerous cervix tissue samples Keywords: other

Organism:

Homo sapiens

Type:

Expression profiling by array

Dataset:

GDS470

Platform:

GPL355

33 Samples

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(Submitter supplied) To explore the potential involvement of lncRNAs in hepatocellular carcinoma (HCC) oncogenesis, we conducted lncRNA and mRNA profiling in 3 pairs of human HCC and adjacent normal tissue (NT) by microarray. With abundant probes accounting for 33,045 lncRNAs and 30,215 coding transcripts in our microarray, the number of lncRNAs and coding transcripts that could be detected here is 10,149 and 14,944, respectively. more...

Organism:

Homo sapiens

Type:

Expression profiling by array; Non-coding RNA profiling by array

Platform:

GPL15314

6 Samples

Download data: TXT

(Submitter supplied) This is a study indented to investigate the alterations in the molecular profile of cervix uteri, as it progresses thorough various FIGO stages of carcinoma, by means of global gene expression profiling, in a cohort of Indian patients. In addition expresion profiles of early and advanced stage cervical cancer were compared to identify biomarkers and therapeutic targets for the advanced stages.

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL7025

29 Samples

Download data: GPR

(Submitter supplied) Identifying key genes to evaluate the therapeutic responses of chemoradiotherapy. Keywords: Cervical cancer, chemoradiotherapy, biopsy, CDKN1A, Bax

Organism:

Homo sapiens

Type:

Expression profiling by array

Dataset:

GDS3017

Platform:

GPL2895

156 Samples

Download data: TXT

Analysis of cervical cancer biopsy samples from patients receiving radiotherapy alone or radiotherapy plus concomitant chemotherapy with cisplatin (CRT). Results provide insight into the molecular mechanisms underlying the therapeutic response to CRT.

Organism:

Homo sapiens

Type:

Expression profiling by array, count, 2 agent, 39 individual, 2 protocol sets

Platform:

GPL2895

Series:

GSE3578

156 Samples

Download data: TXT

(Submitter supplied) Gene expression profiling of normal cervix, CIN's and cancer cervix, with an intent to identify genes involved in the malignant transformation of normal cervix and to identify genes which can be used as biomarkers for early diagnosis. Identification of genes for predicting radiation response using microarray gene expression studies Keywords: Patient tissue samples

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL6699

40 Samples

Download data: GPR

(Submitter supplied) Cervical cancers is the second most malignancy in women. It has been clinically important histological variants such as squamous cell carcinoma (SCC) and adenocarcinoma (AC) and adenosquamous carcinomas (ASC). It has been postulated that AC and ASC has a worse prognosis than pure SCC. However, many of the mixed or other types confuses its diagnosis and aggressive/resistant behavior of some tumors has resulted in debate for prognostic role of empirical pathological classification. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL2895

160 Samples

Download data: TXT

(Submitter supplied) A microarray-based strategy using digestion with the methylation-sensitive restriction enzyme HpaII, ligation, and PCR, was performed to assess the DNA methylation status of promoter regions in Six human cervical adenocarcinomas (ACA) and four squamous cell carcinomas (SCC). Two array platforms were used; an array of 11,994 ~1.5kb PCR products from 10,445 promoter regions, and an array of 355,264 oligonucleotides for 18,212 HpaII fragments in 12,617 promoter regions. more...

Organism:

Homo sapiens

Type:

Genome variation profiling by array

Platforms:

GPL6441 GPL6442 GPL8286

24 Samples

Download data: TXT

(Submitter supplied) Circular RNAs (circRNAs) are a new class of endogenous and regulatory non-coding RNAs, but their expressions in tumor and plasma are largely unknown. Here, our study firstly suggested that microarray should be more efficient than RNA sequencing for circRNA profiling. Then, we detected ~80,000 circRNAs expressed in cervical tumors and matched normal tissues by microarray, and ~23,000 of them are differently expressed. more...

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by high throughput sequencing

Platform:

GPL16791

10 Samples

Download data: TXT

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array; Expression profiling by array; Expression profiling by high throughput sequencing

Platforms:

GPL22722 GPL16791 GPL20115

55 Samples

Download data: TXT

(Submitter supplied) Circular RNAs (circRNAs) are a new class of endogenous and regulatory non-coding RNAs, but their expressions in tumor and plasma are largely unknown. Here, our study firstly suggested that microarray should be more efficient than RNA sequencing for circRNA profiling. Then, we detected ~80,000 circRNAs expressed in cervical tumors and matched normal tissues by microarray, and ~23,000 of them are differently expressed. more...

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platform:

GPL22722

4 Samples

Download data: TXT, XLSX

(Submitter supplied) Circular RNAs (circRNAs) are a new class of endogenous and regulatory non-coding RNAs, but their expressions in tumor and plasma are largely unknown. Here, our study firstly suggested that microarray should be more efficient than RNA sequencing for circRNA profiling. Then, we detected ~80,000 circRNAs expressed in cervical tumors and matched normal tissues by microarray, and ~23,000 of them are differently expressed. more...

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platform:

GPL22722

21 Samples

Download data: TXT, XLSX

(Submitter supplied) Circular RNAs (circRNAs) are a new class of endogenous and regulatory non-coding RNAs, but their expressions in tumor and plasma are largely unknown. Here, our study firstly suggested that microarray should be more efficient than RNA sequencing for circRNA profiling. Then, we detected ~80,000 circRNAs expressed in cervical tumors and matched normal tissues by microarray, and ~23,000 of them are differently expressed. more...

Organism:

Homo sapiens

Type:

Expression profiling by array

Platform:

GPL20115

10 Samples

Download data: TXT, XLSX

(Submitter supplied) Circular RNAs (circRNAs) are a new class of endogenous and regulatory non-coding RNAs, but their expressions in tumor and plasma are largely unknown. Here, our study firstly suggested that microarray should be more efficient than RNA sequencing for circRNA profiling. Then, we detected ~80,000 circRNAs expressed in cervical tumors and matched normal tissues by microarray, and ~23,000 of them are differently expressed. more...

Organism:

Homo sapiens

Type:

Non-coding RNA profiling by array

Platform:

GPL22722

10 Samples

Download data: TXT, XLSX