GEO DataSet Links for PMC (Select 4596667) - GEO DataSets

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Links from PMC

Items: 4

Select item 2000709111.

RNA-seq in bas1 and ino4 mutants

(Submitter supplied) Meiotic recombination is initiated by developmentally programmed DNA double-strand breaks (DSBs). In S. cerevisiae, the vast majority of DSBs occur in the nucleosome-depleted regions at gene promoters, where transcription factors (TFs) B296bind. It has been proposed that TF binding can stimulate DSB formation nearby by modulating local chromatin structure. However, a prior study in TF bas1 mutant suggested that the role of TF binding in determining break formation is complex. more...

Organism:: Saccharomyces cerevisiae

Type:: Expression profiling by high throughput sequencing

Platform:: GPL13821
6 Samples

Download data: TXT

Series

Accession:: GSE70911

ID:: 200070911

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000679122.

Bas1 and Ino4 ChIP-seq

(Submitter supplied) Meiotic recombination is initiated by developmentally programmed DNA double-strand breaks (DSBs). In S. cerevisiae, the vast majority of DSBs occur in the nucleosome-depleted regions at gene promoters, where transcription factors (TFs) bind. It has been proposed that TF binding can stimulate DSB formation nearby by modulating local chromatin structure. However, a prior study in TF bas1 mutant suggested that the role of TF binding in determining break formation is complex. more...

Organism:: Saccharomyces cerevisiae

Type:: Genome binding/occupancy profiling by high throughput sequencing

Platform:: GPL17342
4 Samples

Download data: TXT

Series

Accession:: GSE67912

ID:: 200067912

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000679103.

Spo11-oligo mapping in bas1 and ino4 mutants

(Submitter supplied) Meiotic recombination is initiated by developmentally programmed DNA double-strand breaks (DSBs). In S. cerevisiae, the vast majority of DSBs occur in the nucleosome-depleted regions at gene promoters, where transcription factors (TFs) bind. It has been proposed that TF binding can stimulate DSB formation nearby by modulating local chromatin structure. However, a prior study in TF bas1 mutant suggested that the role of TF binding in determining break formation is complex. more...

Organism:: Saccharomyces cerevisiae

Type:: Other

Platform:: GPL17342
9 Samples

Download data: WIG

Series

Accession:: GSE67910

ID:: 200067910

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2000679074.

Histone 3 lysine 4 trimethylation (H3K4me3) ChIP in bas1 and ino4 mutants

(Submitter supplied) Meiotic recombination is initiated by developmentally programmed DNA double-strand breaks (DSBs). In S. cerevisiae, the vast majority of DSBs occur in the nucleosome-depleted regions at gene promoters, where transcription factors (TFs) bind. It has been proposed that TF binding can stimulate DSB formation nearby by modulating local chromatin structure. However, a prior study in TF bas1 mutant suggested that the role of TF binding in determining break formation is complex. more...