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Items: 19

1.

H3.3 phosphorylation promotes enhancer acetylation and lineage specification

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.
Organism:
Mus musculus
Type:
Genome binding/occupancy profiling by high throughput sequencing; Expression profiling by high throughput sequencing
Platform:
GPL19057
80 Samples
Download data: BW
Series
Accession:
GSE114551
ID:
200114551
2.

H3.3 phosphorylation promotes enhancer acetylation and lineage specification [RNA-seq]

(Submitter supplied) H3.3 phosphorylation promotes high levels of histone acetylation in mouse embryonic stem cells, which are central to the initiation of new transcription during lineage specification.
Organism:
Mus musculus
Type:
Expression profiling by high throughput sequencing
Platform:
GPL19057
16 Samples
Download data: BW
Series
Accession:
GSE114549
ID:
200114549
3.

LPS hypersensitivity of gp130 mutant mice is independent of elevated hematopoietic TLR4 signaling

(Submitter supplied) The inflammatory mediator IL6 induced by LPS, which signals via TLR4, has been shown to feedback and augment TLR4 signaling when over-produced in LPS hypersensitive gp130F/F mice. The identity of the LPS/TLR4 responsive inflammatory signaling pathways and gene networks which are modulated by IL6 are unknown. Therefore, to understand the molecular consequences of gp130 hyperactivity in non-haemopoietic tissue on LPS-induced systemic inflammation, global gene expression profiling of livers was performed.
Organism:
Mus musculus
Type:
Expression profiling by array
Platform:
GPL8331
12 Samples
Download data: TXT
Series
Accession:
GSE29311
ID:
200029311
4.

ESC_HIRAKO2_RNA-seq_rep2

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL19057
Series:
GSE114549 GSE114551
Download data: BW
Sample
Accession:
GSM3507525
ID:
303507525
5.

ESC_HIRAKO2_RNA-seq_rep1

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL19057
Series:
GSE114549 GSE114551
Download data: BW
Sample
Accession:
GSM3507524
ID:
303507524
6.

ESC_HIRAWT2_RNA-seq_rep2 (ctrl for HIRA KO2)

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL19057
Series:
GSE114549 GSE114551
Download data: BW
Sample
Accession:
GSM3507523
ID:
303507523
7.

ESC_HIRAWT2_RNA-seq_rep1 (ctrl for HIRA KO2)

Organism:
Mus musculus
Source name:
Embryonic stem cells
Platform:
GPL19057
Series:
GSE114549 GSE114551
Download data: BW
Sample
Accession:
GSM3507522
ID:
303507522
8.

gp130F/F mutant liver treated LPS , replicate 3

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724396
ID:
300724396
9.

gp130F/F mutant liver treated LPS , replicate 2

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724395
ID:
300724395
10.

gp130F/F mutant liver treated LPS , replicate 1

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724394
ID:
300724394
11.

gp130F/F mutant liver control, replicate 3

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724393
ID:
300724393
12.

gp130F/F mutant liver control, replicate 2

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724392
ID:
300724392
13.

gp130F/F mutant liver control, replicate 1

Organism:
Mus musculus
Source name:
gp130F/F mutant Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724391
ID:
300724391
14.

wild type liver treated LPS, replicate 3

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724390
ID:
300724390
15.

wild type liver treated LPS, replicate 2

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724389
ID:
300724389
16.

wild type liver treated LPS, replicate 1

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724388
ID:
300724388
17.

wild type liver control, replicate 3

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724387
ID:
300724387
18.

wild type liver control, replicate 2

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724386
ID:
300724386
19.

wild type liver control, replicate 1

Organism:
Mus musculus
Source name:
wildtype Liver (channel 1) Pooled whole mouse embryos e17.5 (channel 2)
Platform:
GPL8331
Series:
GSE29311
Download data: TXT
Sample
Accession:
GSM724385
ID:
300724385
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Supplemental Content

db=gds|term=txid10090[orgn]%20AND%20%22strain%20C57BL/6/129Sv%22[All%20Fields]|query=1|qty=2|blobid=MCID_6638b315679af6518ba2eeab|ismultiple=true|min_list=5|max_list=20|def_tree=20|def_list=|def_view=|url=/Taxonomy/backend/subset.cgi?|trace_url=/stat?
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