txid5802[Organism] - GEO DataSets

Warning: The NCBI web site requires JavaScript to function. more...

Search results

Items: 1 to 20 of 75

<< First< Prev

Page of 4

Select item 2002699821.

Transcriptome-wide mapping of internal mRNA N7-methylguanosine in sporulated and unsporulated oocysts of Eimeria tenella reveals stage-specific signatures

(Submitter supplied) Growing evidence indicates that 7-methylguanosine (m7G) modification plays critical roles in epigenetic regulation. However, no data regarding m7G modification are currently available in Eimeria tenella, a highly virulent species causing coccidiosis in chickens. Thus, in the present study, we explored the distribution of internal mRNA m7G modification in sporulated and unsporulated oocysts of E. tenella as well as its biological functions during oocyst development. more...

Organism:: Eimeria tenella

Type:: Expression profiling by high throughput sequencing; Other

Platform:: GPL32957
12 Samples

Download data: XLSX

Series

Accession:: GSE269982

ID:: 200269982

Select item 2002492322.

Comprehensive analysis of mRNA 5-methylcytosine modification in Eimeria tenella oocysts

(Submitter supplied) 5-methylcytosine (m5C) is a type of RNA modifications reported to regulate diverse biological processes. However, the distribution and biological functions of m5C in E. tenella mRNAs remain largely unknown. Herein, we report transcriptome-wide profiling of mRNA m5C in E. tenella by applying m5C RNA immunoprecipitation followed by a deep-sequencing approach (m5C-RIP-seq). Our data showed that m5C peaks were distributed across the whole mRNA body. more...

Organism:: Eimeria tenella

Type:: Expression profiling by high throughput sequencing; Methylation profiling by high throughput sequencing

Platform:: GPL32957
12 Samples

Download data: XLSX

Series

Accession:: GSE249232

ID:: 200249232

Select item 2002212143.

Comprehensive analysis of mRNA N6-methyladenosine modification in Eimeria tenella unsporulated oocysts and sporulated oocysts

(Submitter supplied) N6-methyladenosine (m6A) modification, one of the most abundant RNA modification forms, is associated with almost all the aspects of RNA metabolism. In the present study, we surveyed the transcriptome-wide prevalence of m6A in sporulated oocysts and unsporulated oocysts of E. tenella. Methylated RNA immunoprecipitation sequencing (MeRIP-seq) analysis showed that m6A modifications were most abundant in the coding sequence, followed by stop codon. more...

Organism:: Eimeria tenella

Type:: Expression profiling by high throughput sequencing; Other

Platform:: GPL32957
12 Samples

Download data: XLSX

Series

Accession:: GSE221214

ID:: 200221214

Select item 2001543934.

Dual RNA-seq transcriptome analysis of chicken macrophage-like cells (HD11) infected in vitro with Eimeria tenella

(Submitter supplied) In order to elucidate the infection mechanisms of Eimeria tenella and the chicken immune response, chicken macrophage cell cultures of cell line HD-11 were infected with Eimeria tenella strain Hougton sporozoites. Samples were taken at 0, 2, 4, 12, 24, 48 and 72 hours post-infection and, purified and mRNA sequenced. A dual-RNA seq analysis was carried out, comparing the expression of infected chicken macrophages with uninfected ones at the same time points post-infection and comparing E. more...

Organism:: Gallus gallus; Eimeria tenella

Type:: Expression profiling by high throughput sequencing

Platforms:: GPL28863 GPL19005 GPL28864
39 Samples

Download data: CSV

Series

Accession:: GSE154393

ID:: 200154393

PubMed Full text in PMC Similar studies SRA Run Selector

Select item 2001143475.

Comparative Transcriptome Analyses of Drug-sensitive and Drug-resistant Strains of Eimeria tenella by RNA-sequencing

(Submitter supplied) To gain insights into the molecular mechnism governing the drug resistance of Eimeria tenella, two drug-resistant strains of E. tenella, maduramicin-resistant (MRR) strain and diclazuril-resistant (DZR) strain were induced.We carried out comparative transcriptome analyses of a drug-sensitive strain (DS) and two drug-resistant strains (MRR and DZR) of E. tenella by RNA-seqencing. A total of 1070 DEGs, 672 upregulated and 398 downregulated, were identified in MRR vs. more...

Organism:: Eimeria tenella

Type:: Expression profiling by high throughput sequencing

Platform:: GPL24988
9 Samples

Download data: TXT

Series

Accession:: GSE114347

ID:: 200114347

PubMed Similar studies SRA Run Selector

Select item 2000396026.

Comparative analysis of Gallus gallus cecal epithelia following Eimeria tenella infection

(Submitter supplied) Relative expression levels of mRNAs in chicken cecal epithelia experimentally infected with Eimeria tenella were measured at 4.5 days post-infection. Two weeks old chickens were uninfected (negative control) or were orally inoculated with sporulated oocysts of Eimeria tenella. Cecal epithelia samples were collected from >12 birds in infected or uninfected group at 4.5 d following infections, in which samples from 4 birds were pooled together to form a total 3 biological replicates in each group. more...

Organism:: Gallus gallus; Eimeria tenella

Type:: Expression profiling by array

Platform:: GPL3213
7 Samples

Download data: CEL

Series

Accession:: GSE39602

ID:: 200039602

PubMed Full text in PMC Similar studies Analyze with GEO2R

Select item 1000329577.

Illumina NovaSeq 6000 (Eimeria tenella)

Organism:: Eimeria tenella

3 Series
36 Samples

Download data

Platform

Accession:: GPL32957

ID:: 100032957

Select item 1000288648.

Illumina HiSeq 2500 (Eimeria tenella)

Organism:: Eimeria tenella

1 Series
1 Sample

Download data

Platform

Accession:: GPL28864

ID:: 100028864

Select item 1000288639.

Illumina HiSeq 2500 (Eimeria tenella; Gallus gallus)

Organism:: Eimeria tenella; Gallus gallus

1 Series
18 Samples

Download data

Platform

Accession:: GPL28863

ID:: 100028863

Select item 10002498810.

Illumina HiSeq 2000 (Eimeria tenella)

Organism:: Eimeria tenella

1 Series
9 Samples

Download data

Platform

Accession:: GPL24988

ID:: 100024988

Select item 30833186811.

Unsporulated oocysts3.IP

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331868

ID:: 308331868

SRA Run Selector

Select item 30833186712.

Unsporulated oocysts3.Input

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331867

ID:: 308331867

SRA Run Selector

Select item 30833186613.

Unsporulated oocysts2.IP

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331866

ID:: 308331866

SRA Run Selector

Select item 30833186514.

Unsporulated oocysts2.Input

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331865

ID:: 308331865

SRA Run Selector

Select item 30833186415.

Unsporulated oocysts1.IP

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331864

ID:: 308331864

SRA Run Selector

Select item 30833186316.

Unsporulated oocysts1.Input

Organism:: Eimeria tenella

Source name:: Unsporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331863

ID:: 308331863

SRA Run Selector

Select item 30833186217.

Sporulated oocysts3.IP

Organism:: Eimeria tenella

Source name:: Sporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331862

ID:: 308331862

SRA Run Selector

Select item 30833186118.

Sporulated oocysts3.Input

Organism:: Eimeria tenella

Source name:: Sporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331861

ID:: 308331861

SRA Run Selector

Select item 30833186019.

Sporulated oocysts2.IP

Organism:: Eimeria tenella

Source name:: Sporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331860

ID:: 308331860

SRA Run Selector

Select item 30833185920.

Sporulated oocysts2.Input

Organism:: Eimeria tenella

Source name:: Sporulated oocysts

Platform:: GPL32957
Series:: GSE269982

Download data

Sample

Accession:: GSM8331859

ID:: 308331859

SRA Run Selector

<< First< Prev

Page of 4

Next >Last >>

Supplemental Content

Filters: Manage Filters

Find related data

Search details

Important Links

Recent activity

Clear Turn Off Turn On

txid5802[Organism] (75)
GEO DataSets
Aspergillus luchuensis isolate WTP1-1-E23 beta-tubulin (benA) gene, partial cds
Aspergillus luchuensis isolate WTP1-1-E23 beta-tubulin (benA) gene, partial cds
gi|1760825863|gb|MK417808.1|

Nucleotide
Uncultured bacterium clone C3 16S ribosomal RNA gene, partial sequence
Uncultured bacterium clone C3 16S ribosomal RNA gene, partial sequence
gi|440352650|gb|KC236903.1|

Nucleotide
Borrelia burgdorferi strain 132b glyceraldehyde 3-phosphate dehydrogenase (gap) ...
Borrelia burgdorferi strain 132b glyceraldehyde 3-phosphate dehydrogenase (gap) gene, partial cds
gi|146743615|gb|EF537485.1|

Nucleotide
Bacillus safensis strain JJ1144 JJ-1144_contig_10, whole genome shotgun sequence
Bacillus safensis strain JJ1144 JJ-1144_contig_10, whole genome shotgun sequence
gi|2691626324|ref|NZ_JBALSZ01000001 gnl|WGS:NZ_JBALSZ01|JJ-1144_contig_10

Nucleotide

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

You are here: NCBI > Genes & Expression > Gene Expression Omnibus (GEO) Datasets

Support Center

GEO DataSets

Functional Genomics Studies

Result Filters

Entry type

Organism

Study type

Author

Attribute name

Publication dates

Custom date range

Additional filters

Send to:

Search results

Items: 1 to 20 of 75

Send to:

Supplemental Content

Find related data

Search details

Important Links

Recent activity