GEO DataSets

(Submitter supplied) Differential expression of electron transfer genes during growth with insoluble iron provided as an electron acceptor compared to soluble iron.

Organism:

Ferroglobus placidus; Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL18954

4 Samples

Download data: PAIR

(Submitter supplied) Comparison of acetate- to phenylacetate-grown F. placidus cells to identify genes that are potentially involved in anaerobic phenylacetate degradation by this unique hypertherophilic archaeon.

Organism:

Ferroglobus placidus; Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL18954

5 Samples

Download data: PAIR

(Submitter supplied) Comparison of acetate- to butyrate-grown F. placidus cells to identify genes that are potentially involved in fatty acid degradation by this unique hypertherophilic archaeon.

Organism:

Ferroglobus placidus; Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL18954

6 Samples

Download data: PAIR

(Submitter supplied) Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provided as the sole electron donor and Fe(III) as the sole electron acceptor. The stoichiometry of benzene loss and Fe(III) reduction, as well as the conversion of [14C]-benzene to [14C]-carbon dioxide, was consistent with complete oxidation of benzene to carbon dioxide with electron transfer to Fe(III). more...

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

5 Samples

Download data: CALLS, PAIR

(Submitter supplied) Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provided as the sole electron donor and Fe(III) as the sole electron acceptor. The stoichiometry of benzene loss and Fe(III) reduction, as well as the conversion of [14C]-benzene to [14C]-carbon dioxide, was consistent with complete oxidation of benzene to carbon dioxide with electron transfer to Fe(III). more...

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

6 Samples

Download data: CALLS, PAIR

(Submitter supplied) Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provided as the sole electron donor and Fe(III) as the sole electron acceptor. The stoichiometry of benzene loss and Fe(III) reduction, as well as the conversion of [14C]-benzene to [14C]-carbon dioxide, was consistent with complete oxidation of benzene to carbon dioxide with electron transfer to Fe(III). more...

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

6 Samples

Download data: CALLS, PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

11 Samples

Download data: CALLS, PAIR

(Submitter supplied) Anaerobic benzene oxidation coupled to the reduction of Fe(III) was studied in Ferroglobus placidus in order to learn more about how such a stable molecule could be metabolized under strict anaerobic conditions. F. placidus conserved energy to support growth at 85°C in a medium with benzene provided as the sole electron donor and Fe(III) as the sole electron acceptor. The stoichiometry of benzene loss and Fe(III) reduction, as well as the conversion of [14C]-benzene to [14C]-carbon dioxide, was consistent with complete oxidation of benzene to carbon dioxide with electron transfer to Fe(III). more...

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

5 Samples

Download data: CALLS, PAIR

(Submitter supplied) This SuperSeries is composed of the SubSeries listed below.

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

10 Samples

Download data: CALLS, PAIR

(Submitter supplied) Investigation of whole genome gene expression level changes in Ferroglobus placidus grown on phenol versus acetate as electron donors, with ferric citrate as electron acceptor.

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

6 Samples

Download data: CALLS, PAIR

(Submitter supplied) Insight into the mechanisms for the anaerobic metabolism of aromatic compounds by the hyperthermophilic archaeon Ferroglobus placidus is expected to improve understanding of the degradation of aromatics in hot (> 80 °C) environments and to identify enzymes that might have biotechnological applications. Analysis of the F. placidus genome revealed genes predicted to encode enzymes homologous to those previously identified as playing a role in benzoate and phenol metabolism in mesophilic bacteria. more...

Organism:

Ferroglobus placidus DSM 10642

Type:

Expression profiling by array

Platform:

GPL11378

4 Samples

Download data: CALLS, PAIR

(Submitter supplied) 4-plex expression for Ferroglobus placidus strain DSM 10642; from http://genome.ornl.gov/microbiol/fpla, 15jan09 gene models; 2613 starting genes; 9 probes per target, 45-60mer probes, 2613 exemplars for 2613 genes, 3 copies of each probe on the array 091030_ZS_Fplacidus_expr.ndf 091030_ZS_Fplacidus_expr.ngd 091030_ZS_Fplacidus_expr_X4.ncd Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. more...

Organism:

Ferroglobus placidus DSM 10642

3 Series

12 Samples

Download data: NCD, NDF, NGD

(Submitter supplied) 4-plex expression for Ferroglobus placidus strain DSM 10642; from http://genome.ornl.gov/microbiol/fpla, 15jan09 gene models; 2613 starting genes; 9 probes per target, 45-60mer probes, 2613 exemplars for 2613 genes, 3 copies of each probe on the array Protocol: High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.

Organism:

Ferroglobus placidus DSM 10642

8 Series

13 Samples

Download data: NDF, NGD