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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016206.2 RefSeqGene
- Range
-
5000..107084
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001168374.2 → NP_001161846.1 dyslexia-associated protein KIAA0319 isoform b
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate internal exon and uses an alternate start codon, compared to variant 1. The encoded isoform (b) is shorter and has a distinct N-terminus, compared to isoform a.
- Source sequence(s)
-
AK296426, AL031230, AL031775, AL512385, BC152460
- Consensus CDS
-
CCDS54970.1
- UniProtKB/Swiss-Prot
-
Q5VV43
- Related
- ENSP00000442403.1, ENST00000535378.5
- Conserved Domains (3) summary
-
- smart00765
Location:11 → 93
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:426 → 512
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam05466
Location:198 → 332
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001168375.2 → NP_001161847.1 dyslexia-associated protein KIAA0319 isoform a precursor
See identical proteins and their annotated locations for NP_001161847.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, and 7 all encode the same isoform (a).
- Source sequence(s)
-
AK296310, AL031230, AL031775, AL512385, DA316925, DA808234
- Consensus CDS
-
CCDS34348.1
- UniProtKB/Swiss-Prot
- A7MD37, B2RTU7, B4DHA7, B4DK75, B7ZML3, F5H123, Q5VV43, Q9UJC8, Q9Y4G7
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- pfam08604
Location:167 → 329
- Nup153; Nucleoporin Nup153-like
-
NM_001168376.2 → NP_001161848.1 dyslexia-associated protein KIAA0319 isoform c
See identical proteins and their annotated locations for NP_001161848.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR, lacks an exon and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (c) has a shorter N-terminus, compared to isoform a. Variants 4 and 10 both encode the same isoform (c).
- Source sequence(s)
-
AK295008, AL031230, AL031775, AL512385, DA316925, DA808234
- Consensus CDS
-
CCDS54969.1
- UniProtKB/Swiss-Prot
-
Q5VV43
- Related
- ENSP00000401086.2, ENST00000430948.6
- Conserved Domains (4) summary
-
- smart00089
Location:390 → 476
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:501 → 781
- REJ; REJ domain
- cl06508
Location:4 → 57
- MANEC; MANEC domain
- cl25756
Location:119 → 296
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001168377.2 → NP_001161849.1 dyslexia-associated protein KIAA0319 isoform d precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) lacks two consecutive exons in the 3' coding region, but maintains the reading frame, compared to variant 1. The encoded isoform (d) is shorter than isoform a.
- Source sequence(s)
-
AK295008, AL031230, AL031775, AL512385, BC144628, BC152460
- Consensus CDS
-
CCDS54971.1
- UniProtKB/Swiss-Prot
-
Q5VV43
- Related
- ENSP00000439700.1, ENST00000537886.5
- Conserved Domains (3) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam05466
Location:207 → 341
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001252328.2 → NP_001239257.1 dyslexia-associated protein KIAA0319 isoform e
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR, lacks a large portion of the 5' coding region and initiates translation at a downstream, in-frame start codon, compared to variant 1. The encoded isoform (e) has a shorter N-terminus, compared to isoform a.
- Source sequence(s)
-
AK310289, AL031230
- Consensus CDS
-
CCDS75409.1
- UniProtKB/TrEMBL
-
A0A087X0U9
- Related
- ENSP00000483665.1, ENST00000616673.4
- Conserved Domains (1) summary
-
- smart00089
Location:37 → 123
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
-
NM_001350403.2 → NP_001337332.1 dyslexia-associated protein KIAA0319 isoform a precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (7), as well as variants 1 and 2, encodes isoform a.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Consensus CDS
-
CCDS34348.1
- UniProtKB/Swiss-Prot
- A7MD37, B2RTU7, B4DHA7, B4DK75, B7ZML3, F5H123, Q5VV43, Q9UJC8, Q9Y4G7
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- pfam08604
Location:167 → 329
- Nup153; Nucleoporin Nup153-like
-
NM_001350404.2 → NP_001337333.1 dyslexia-associated protein KIAA0319 isoform f
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) encodes isoform f.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (4) summary
-
- smart00765
Location:14 → 96
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:429 → 515
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:540 → 820
- REJ; REJ domain
- cl25756
Location:158 → 335
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001350405.2 → NP_001337334.1 dyslexia-associated protein KIAA0319 isoform g precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) encodes isoform g.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:402 → 488
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:513 → 793
- REJ; REJ domain
- pfam08604
Location:167 → 329
- Nup153; Nucleoporin Nup153-like
-
NM_001350406.2 → NP_001337335.1 dyslexia-associated protein KIAA0319 isoform c
Status: REVIEWED
- Description
- Transcript Variant: This variant (10), as well as variant 4, encodes isoform c.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Consensus CDS
-
CCDS54969.1
- Conserved Domains (4) summary
-
- smart00089
Location:390 → 476
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:501 → 781
- REJ; REJ domain
- cl06508
Location:4 → 57
- MANEC; MANEC domain
- cl25756
Location:119 → 296
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001350407.2 → NP_001337336.1 dyslexia-associated protein KIAA0319 isoform h precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (11), as well as variant 12, encodes isoform h.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- cl25756
Location:164 → 341
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001350408.2 → NP_001337337.1 dyslexia-associated protein KIAA0319 isoform h precursor
Status: REVIEWED
- Description
- Transcript Variant: This variant (12), as well as variant 11, encodes isoform h.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- cl25756
Location:164 → 341
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001350409.2 → NP_001337338.1 dyslexia-associated protein KIAA0319 isoform i
Status: REVIEWED
- Description
- Transcript Variant: This variant (13), as well as variant 14, encodes isoform i.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (3) summary
-
- smart00089
Location:283 → 369
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:394 → 674
- REJ; REJ domain
- cl25756
Location:12 → 189
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_001350410.2 → NP_001337339.1 dyslexia-associated protein KIAA0319 isoform i
Status: REVIEWED
- Description
- Transcript Variant: This variant (14), as well as variant 13, encodes isoform i.
- Source sequence(s)
-
AL031230, AL031775, AL512385
- Conserved Domains (3) summary
-
- smart00089
Location:283 → 369
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:394 → 674
- REJ; REJ domain
- cl25756
Location:12 → 189
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
NM_014809.4 → NP_055624.2 dyslexia-associated protein KIAA0319 isoform a precursor
See identical proteins and their annotated locations for NP_055624.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a). Variants 1, 2, and 7 all encode the same isoform (a).
- Source sequence(s)
-
AB002317, AL031230, AL031775, AL512385
- Consensus CDS
-
CCDS34348.1
- UniProtKB/Swiss-Prot
- A7MD37, B2RTU7, B4DHA7, B4DK75, B7ZML3, F5H123, Q5VV43, Q9UJC8, Q9Y4G7
- Related
- ENSP00000367459.3, ENST00000378214.8
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- pfam08604
Location:167 → 329
- Nup153; Nucleoporin Nup153-like
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
24540141..24646191 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017011546.3 → XP_016867035.1 dyslexia-associated protein KIAA0319 isoform X4
-
XM_047419602.1 → XP_047275558.1 dyslexia-associated protein KIAA0319 isoform X2
-
XM_047419604.1 → XP_047275560.1 dyslexia-associated protein KIAA0319 isoform X6
-
XM_017011550.2 → XP_016867039.1 dyslexia-associated protein KIAA0319 isoform X5
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:435 → 521
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:546 → 826
- REJ; REJ domain
- cl25756
Location:164 → 341
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
-
XM_047419603.1 → XP_047275559.1 dyslexia-associated protein KIAA0319 isoform X3
-
XM_017011544.2 → XP_016867033.1 dyslexia-associated protein KIAA0319 isoform X3
- Conserved Domains (4) summary
-
- smart00765
Location:20 → 102
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:402 → 488
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam02010
Location:513 → 793
- REJ; REJ domain
- pfam08604
Location:167 → 329
- Nup153; Nucleoporin Nup153-like
-
XM_017011541.2 → XP_016867030.1 dyslexia-associated protein KIAA0319 isoform X1
- UniProtKB/Swiss-Prot
-
Q5VV43
- Conserved Domains (3) summary
-
- smart00765
Location:11 → 93
- MANEC; The MANEC domain, formerly called MANSC
- smart00089
Location:426 → 512
- PKD; Repeats in polycystic kidney disease 1 (PKD1) and other proteins
- pfam05466
Location:198 → 332
- BASP1; Brain acid soluble protein 1 (BASP1 protein)
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
24414072..24516155 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)