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15359 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			SRA Run Selector
GSE13973	ChIP-Seq of RNA Pol II with antibodies S2, 4H8 and 8WG16 during C. elegans L1 arrest and recovery	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	14	XLS SRA Run Selector	L. Ryan Baugh	Feb 27, 2009
GSE14022	Mapping Novel Chromatin Regions Using Sono-Seq	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	TXT SRA Run Selector	Raymond K Auerbach	Dec 18, 2008
GSE14025	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis	4	BED TXT SRA Run Selector	Gert Jan Veenstra	Sep 15, 2009
GSE14092	An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (II)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	TXT SRA Run Selector	Jindan Yu	May 18, 2010
GSE14254	Global Mapping of Histone H3 K4 and K27 Trimethylation: Lineage Fate Determination of Differentiating CD4+ T Cells	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	12	BED SRA Run Selector	Weiqun Peng	Jan 21, 2009
GSE14283	A general mechanism for transcription regulation by Oct1 and Oct4 in response to genotoxic and oxidative stress	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Dean Tantin	Jan 22, 2009
GSE14344	esBAF is an essential component of the core pluripotency transcriptional network	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	8	BED CEL TXT SRA Run Selector	Raja Jothi	Jan 20, 2009
GSE14545	Identification of transcription factor Pha-4 binding regions	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Jan 24, 2009
GSE14586	Cdx2 Binding Sites On Cdx2 Expressing ES Cells	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	2	TXT SRA Run Selector	Minoru S.H. Ko	Oct 01, 2009
GSE14600	Target genes of the MADS transcription factor SEPALLATA3, ChIP-seq	Genome binding/occupancy profiling by high throughput sequencing	Arabidopsis thaliana	5	TXT SRA Run Selector	Gerco Angenent	Apr 21, 2009
GSE14664	ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED TXT SRA Run Selector	H.G. Stunnenberg	Mar 09, 2009
GSE15188	Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo	Genome binding/occupancy profiling by high throughput sequencing	Escherichia coli Saccharomyces cerevisiae	3	TXT WIG SRA Run Selector	Ghia Euskirchen	Jul 15, 2009
GSE15286	Epigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Zea mays	14	BED FA TXT SRA Run Selector	Xiangfeng Wang	Apr 28, 2009
GSE15353	Genome-wide profiles of STAT1 DNA association using chromatin immunoprecipitation and massively parallel sequencing	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	13	TXT WIG SRA Run Selector	Eric Chuah	Mar 23, 2009
GSE15501	Identification of transcription factor DPY-27 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 03, 2009
GSE15519	Expression and ChIP-seq analyses of embryonic stem cells, extraembryonic endoderm stem cells, and trophoblast stem cells	Expression profiling by array Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	16	CEL CHP WIG SRA Run Selector	Brian Joseph Cox	May 17, 2010
GSE15535	Genome-wide identification of the occupancy of RNA polymerase II (POL II) at L4/young adult stage in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15567	Identification of transcription factor DAF-16 binding sites in C. elegans	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15625	Identification of transcription factor MAB-5 binding sites	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009
GSE15628	RNA polymerase occupancy at embryonic stage and starved L1 stage in pha-4 transgenic worms	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	6	BED TXT SRA Run Selector	Flora Vaccarino	Apr 11, 2009