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99917 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Expression profiling by high throughput sequencing
GSE13441	Drosophila melanogaster short read RNA	Expression profiling by high throughput sequencing	Drosophila melanogaster	5	TXT SRA Run Selector	Marijke Jeltje van Baren	Nov 04, 2008
GSE13543	B. anthracis transcriptome analysis using Illumina and SOLiD sequencing	Expression profiling by high throughput sequencing	Bacillus anthracis	8	QUAL TXT SRA Run Selector	Nicholas Bergman	May 01, 2009
GSE13652	Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing	Expression profiling by high throughput sequencing	Homo sapiens	6	TXT SRA Run Selector	Weijun Gao	Nov 19, 2008
GSE13750	Genome-Wide Analysis In Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling	Other Expression profiling by high throughput sequencing	Saccharomyces cerevisiae	8	TXT SRA Run Selector	Nicholas T Ingolia	Feb 12, 2009
GSE14025	A Hierarchy of H3K4me3 and H3K27me3 Acquisition in Spatial Gene Regulation in Xenopus Embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Xenopus tropicalis	4	BED TXT SRA Run Selector	Gert Jan Veenstra	Sep 15, 2009
GSE14092	An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression (II)	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	60	TXT SRA Run Selector	Jindan Yu	May 18, 2010
GSE14097	An Integrated Network of Androgen Receptor and TMPRSS2-ERG Gene Fusion in Prostate Cancer Progression	Expression profiling by array Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	75	TXT	Jindan Yu	May 18, 2010
GSE14605	mRNA-Seq Whole Transcriptome Analysis of a Single Cell	Expression profiling by high throughput sequencing	Mus musculus	6	SRF TXT WIG	Catalin Barbacioru	Feb 23, 2009
GSE14782	Mycobacterium marinum chronic infection of adult zebrafish	Expression profiling by array Expression profiling by high throughput sequencing	Danio rerio	8	XML SRA Run Selector	Anna Magdalena Zakrzewska	Jun 30, 2009
GSE15286	Epigenetic modifications and their relationships to smRNA and mRNA transcriptomes in maize	Genome binding/occupancy profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Zea mays	14	BED FA TXT SRA Run Selector	Xiangfeng Wang	Apr 28, 2009
GSE15292	Drosophila at different time points of development: ChIP-chip, ChIP-seq, RNA-seq	Genome binding/occupancy profiling by genome tiling array Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	936	BED BEDGRAPH TXT	Kevin P. White	Mar 20, 2009
GSE15408	Metatranscriptomic analysis of an anaerobic ammonium oxidizing community dominated by Kuenenia stuttgartiensis	Expression profiling by high throughput sequencing	Candidatus Kuenenia stuttgartiensis	1	TXT SRA Run Selector	Marc Strous	Mar 25, 2010
GSE15596	modENCODE RNA-Seq of Drosophila cell lines Kc167, CME_W1_Cl.8+, S2-DRSC and ML-DmBG3-c2	Expression profiling by high throughput sequencing	Drosophila melanogaster	8	BEDGRAPH GFF SRA Run Selector	Brenton R Graveley	Apr 08, 2009
GSE15651	Listeria monocytogenes Transcriptome with RNA-Seq	Expression profiling by high throughput sequencing	Listeria monocytogenes	4	TXT SRA Run Selector	Lalit Ponnala	Jan 05, 2010
GSE15780	Interplay between c-Jun and TAp73α/β contributes to the apoptosis-survival balance	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	15	BED TSV TXT SRA Run Selector	Marion Lohrum	Mar 01, 2011
GSE16136	Regulation of Gene Expression and Parent-of-Origin Effects in Maize Hybrids	Expression profiling by array Expression profiling by high throughput sequencing	Zea mays	533	TXT SRA Run Selector	Patrick S. Schnable	Nov 20, 2009
GSE16190	Detection of single nucleotide variations in expressed exons of the human genome using RNA-Seq	Expression profiling by high throughput sequencing	Homo sapiens	2	TXT SRA Run Selector	Iouri Chepelev	Jun 15, 2009
GSE16256	UCSD Human Reference Epigenome Mapping Project	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing Non-coding RNA profiling by high throughput sequencing	Homo sapiens	878	BAM BED WIG SRA Run Selector	UCSD AND SALK	Aug 03, 2009
GSE16344	Expression in Aneuploid Drosophila S2 Cells	Genome variation profiling by high throughput sequencing Expression profiling by high throughput sequencing Genome binding/occupancy profiling by array Expression profiling by array	Drosophila melanogaster	38	FTR GPR TXT SRA Run Selector	Brian Oliver	Jan 11, 2010
GSE16367	The Physcomitrella Degradome	Expression profiling by high throughput sequencing	Physcomitrium patens	1	SRA Run Selector	Michael J Axtell	Oct 01, 2009