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472 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		BED
GSE240863	Single cell discovery of m6A RNA modifications in the hippocampus	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	43	BED CSV RDS TXT	Magdalena Justyna Koziol	May 07, 2024
GSE198005	Genome-wide bisulfite sequencing (GWBS) and RNA-seq in hippocampus of Neil1- and Neil2 deficient mice	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	16	BED TXT	Mingyi Yang	May 01, 2024
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE218001	Gut microbiota rewires host mRNA m6A epitranscriptomic landscape via bile acid metabolism	Methylation profiling by high throughput sequencing	Mus musculus	57	BED	Xiaoyun Wang	Apr 21, 2024
GSE157135	DEAD-box helicase 17 (DDX17) protects cardiac function by promoting mitochondrial homeostasis in heart failure	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	6	BED SRA Run Selector	Yuxuan Zheng	Apr 07, 2024
GSE221470	TET activity propagates transcriptional memory through embryonic dormancy	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	266	BED BW	Maximilian Stötzel	Mar 19, 2024
GSE212568	Landscape of TFs binding in mouse early embryos	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	57	BED BEDPE BW	Gran Young	Mar 03, 2024
GSE248696	Landscape of TFs binding in mouse early embryos [Bisulfite-seq]	Methylation profiling by high throughput sequencing	Mus musculus	2	BED	Gran Young	Mar 03, 2024
GSE212005	CDCA7-associated global aberranDNA hypomethylation translates to localized, tissue-specific transcriptional responses [WGBS]	Methylation profiling by high throughput sequencing	Mus musculus	4	BED BW	Lucia Daxinger	Feb 09, 2024
GSE248540	Single molecule DNA methylation reveals unique epigenetic identity profiles of T helper cells	Methylation profiling by high throughput sequencing Other	Mus musculus	14	BED	Hector Hernandez-Vargas	Jan 08, 2024
GSE164154	PDGFRα+ not CD137+ progenitors control visceral obesity via glucocorticoid mediated TEAD1 methylation state	Methylation profiling by high throughput sequencing	Mus musculus	2	BED BW SRA Run Selector	yifan lv	Jan 01, 2024
GSE188518	Analysis of m6A methylome in ABRO1 Knockout heart	Methylation profiling by high throughput sequencing	Mus musculus	4	BED XLSX SRA Run Selector	Kun Wang	Dec 01, 2023
GSE246417	Hypermethylation leads to the loss of HOXA5, resulting in JAG1 expression and NOTCH signaling for renal fibrosis	Methylation profiling by high throughput sequencing	Mus musculus	6	BED	Qingqing Wei	Nov 27, 2023
GSE247051	Highly cooperative chimeric super-SOX induces naïve pluripotency across species	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	84	BED BW	Sergiy Velychko	Nov 27, 2023
GSE244698	Gestational diabetes in mice induces hematopoietic memory that impacts the long-term health of the offspring	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED COV TXT	Reynaud Damien	Nov 13, 2023
GSE225372	Distinct disease mutations in DNMT3A result in a spectrum of behavioral, epigenetic, and transcriptional disruptions	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	100	BED CSV XLSX	Diana Christian Beard	Nov 08, 2023
GSE236018	Hypermethylation suppresses microRNA-219a-2 to activate the ALDH1L2/GSH/PAI-1 pathway for fibronectin degradation in renal fibrosis [RRBS]	Methylation profiling by high throughput sequencing	Mus musculus	8	BED	Qingqing Wei	Nov 01, 2023
GSE236019	Hypermethylation suppresses microRNA-219a-2 to activate the ALDH1L2/GSH/PAI-1 pathway for fibronectin degradation in renal fibrosis	Expression profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	14	BED	Qingqing Wei	Nov 01, 2023
GSE232216	Light-Assisted Single-Stranded Open-Chromatin Analysis in K562 and Spatially Localized Neuronal Single Cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Third-party reanalysis Other Methylation profiling by high throughput sequencing	Homo sapiens Mus musculus	445	BED	Junhyong Kim	Oct 19, 2023
GSE144006	Mechanism of monoallelic expression and allelic rheostat role of DNA methylation (RRBS)	Methylation profiling by high throughput sequencing	Mus musculus	9	BED SRA Run Selector	Saumya Gupta	Sep 20, 2023