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15743 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			BED
GSE231328	Human Smc5/6 recognizes transcription-generated positive DNA supercoils	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	9	BED	Patrick H. Viollier	Jun 10, 2024
GSE237886	Regulatory mechanism of Sox9 gene expression in chondrocytes [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	7	BED	Kenji Hata	Jun 10, 2024
GSE237889	Regulatory mechanism of Sox9 gene expression in chondrocytes	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	13	BED NARROWPEAK	Kenji Hata	Jun 10, 2024
GSE153008	Novel O-GlcNAcylation on Thr71 of histone H4 preferentially localizes to active gene regions	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	8	BED BIGWIG SRA Run Selector	Daisuke Nara	Jun 09, 2024
GSE241429	Comparative single-cell multiome reveals evolutionary innovations in neural progenitor cells during primate corticogenesis	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Macaca mulatta Mus musculus	33	BED MTX TXT	Yiming Sun	Jun 09, 2024
GSE123393	Genome-wide chromatin localization profiling of transcription factor MML-1	Genome binding/occupancy profiling by high throughput sequencing	Caenorhabditis elegans	4	BED BEDGRAPH TXT SRA Run Selector	Ruben Esse	Jun 07, 2024
GSE180483	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	88	BED BW NARROWPEAK XLSX SRA Run Selector	Jacquelyn A Myers	Jun 07, 2024
GSE180487	PHF6 cooperates with SWI/SNF complexes to facilitate transcriptional progression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	137	BED BW NARROWPEAK	Jacquelyn A Myers	Jun 07, 2024
GSE268819	Drosophila melanogaster Set8 and L(3)mbt function in gene expression independently of histone H4 lysine 20 methylation [H4K20me1_CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	27	BED BW	Robert J. Duronio	Jun 07, 2024
GSE268820	Drosophila melanogaster Set8 and L(3)mbt function in gene expression independently of histone H4 lysine 20 methylation [GFP-L3mbt_CUT&RUN]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BED BW	Robert J. Duronio	Jun 07, 2024
GSE209715	Chromatin structure and gene expression signatures in FUS low and high expressed hematopoietic stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Mus musculus	44	BED BW HIC TXT	Jianwei Wang	Jun 06, 2024
GSE242851	Cell fate decision by a morphogen-transcription factor-chromatin modifier axis	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	38	BED BW TXT	jin ming	Jun 06, 2024
GSE227059	Epigenetic therapy activates TE-chimeric transcripts to provide additional source of antigens in glioblastoma stem cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	112	BED BEDGRAPH BW	Daofeng Li	Jun 05, 2024
GSE241026	TCF7L1 regulates colorectal cancer cell migration and invasion by repressing GAS1 expression (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	2	BED BW NARROWPEAK	Gregory S Yochum	Jun 05, 2024
GSE241028	TCF7L1 regulates colorectal cancer cell migration and invasion by repressing GAS1 expression	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	5	BED BW NARROWPEAK	Gregory S Yochum	Jun 05, 2024
GSE206260	H2BFWT nucleosome structure reveals its nucleosome-destabilizing mechanisms through reductions of specific DNA-histone interactions and explains the mechanistic impact of its infertility-related H100R SNP during early spermatogenesis in humans	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	4	BED BEDGRAPH	Toyotaka Ishibashi	Jun 01, 2024
GSE232883	A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BED BW	Marco Osterwalder	Jun 01, 2024
GSE232887	A gene desert required for regulatory control of pleiotropic Shox2 expression and embryonic survival	Other Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens Mus musculus	17	BED BW COOL HIC NARROWPEAK	Marco Osterwalder	Jun 01, 2024
GSE255337	Manipulating the transcriptome and chromatin accessibility in T cells through CRISPR-induced alternative splicing of IKZF1 (ATACseq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	34	BED NARROWPEAK TSV	Jeremy Robert Barker Newman	Jun 01, 2024
GSE261016	Glucocorticoid promotes metastasis of colorectal cancer via co-regulation of glucocorticoid receptor and TET2 (ChIP-Seq)	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	18	BED	Epigenomics Gao	Jun 01, 2024