GEO Browser - GEO

Series

Samples

Platforms

DataSets

259 series

Export

Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster		BEDGRAPH
GSE202042	High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster Homo sapiens Mus musculus	78	BEDGRAPH BW	Maximilian Christian von der Linde	Jun 22, 2024
GSE237742	The N-terminal dimerization domains of human and Drosophila CTCF have similar functionality	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	18	BEDGRAPH	Natalia Klimenko	Apr 17, 2024
GSE239354	The interaction of MLE with CLAMP zinc finger domains is important for dosage compensation in Drosophila melanogaster	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	13	BEDGRAPH NARROWPEAK	Anastasia Revel-Muroz	Mar 20, 2024
GSE228898	Poly(ADP-ribosyl)ating enzymes coordinate changes in the expression of metabolic genes with developmental progression	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH BIGWIG	Alexei Tulin	Nov 17, 2023
GSE247239	Notch signaling and Bsh homeodomain activity are integrated to diversify Drosophila lamina neuron types	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH	Chris Doe	Nov 12, 2023
GSE224967	Chromatin state transitions in the Drosophila intestinal lineage reveal principles of cell type specification	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	63	BEDGRAPH GFF NARROWPEAK	Allison Bardin	Oct 26, 2023
GSE229076	Genome-winding binding profile of KDM5 in Drosophila larval prothoracic gland cells via Targeted DamID analysis	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BEDGRAPH XLSX	Michael Francis Rogers	Oct 16, 2023
GSE229943	Chromatin and gene expression changes during female Drosophila germline stem cell development.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Third-party reanalysis	Drosophila melanogaster	28	BEDGRAPH BW CSV TXT	Allan C Spradling	Aug 16, 2023
GSE225409	Dedifferentiation-derived neural stem cells exhibit perturbed temporal progression	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	8	BEDGRAPH GFF	Owen Marshall	May 24, 2023
GSE199513	Determination of Shavenbaby binding behaviour on S2 cells [chipseq_svb]	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH BW	Cédric Polesello	Dec 14, 2022
GSE199514	Determination of Shavenbaby effect in S2 cells	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	39	BEDGRAPH BW	Cédric Polesello	Dec 14, 2022
GSE193224	A giant virus genome is densely packaged by stable nucleosomes	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster Marseillevirus marseillevirus synthetic construct	117	BED BEDGRAPH BIGWIG FASTA PDF	Jorja Henikoff	Sep 27, 2022
GSE161128	N-terminus of Drosophila MSL1 interacts with DNA-binding proteins and is critical for the recruitment of the dosage compensation complex to the X chromosome	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	19	BEDGRAPH NARROWPEAK SRA Run Selector	Natalia Klimenko	Aug 30, 2022
GSE188643	A Notch-dependent transcriptional mechanism controls expression of temporal patterning factors in Drosophila medulla	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	6	BEDGRAPH GFF	Xin Li	Aug 10, 2022
GSE195654	Profiling RNA at chromatin targets in situ by antibody-targeted tagmentation.	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	95	BEDGRAPH BW DOCX PDF	Jorja Henikoff	Jul 18, 2022
GSE180376	Essential role of Cp190 in physical and regulatory boundary formation in Drosophila	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	48	BEDGRAPH BEDPE BW	Maria Cristina Gambetta	May 12, 2022
GSE174781	Genome-wide distribution analysis of RNA Helicase Maleless (MLE) in Drosophila Melanogaster early male embryo, before (0-2 Hr) and after (2-4 Hr) maternal to zygotic transition (MZT) and in absence of CLAMP	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	4	BEDGRAPH NARROWPEAK SRA Run Selector	Erica Larschan	May 01, 2022
GSE157565	Comparison of genome architecture at two stages of male germline cell differentiation in Drosophila	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Drosophila melanogaster	14	BED BEDGRAPH TXT SRA Run Selector	Artem Ilyin	Feb 01, 2022
GSE174250	Cut&Run in Drosophila melanogaster control, mutant and knockdown ovaries	Genome binding/occupancy profiling by high throughput sequencing	Drosophila melanogaster	28	BEDGRAPH SRA Run Selector	Guillermo A Orsi	Dec 10, 2021
GSE123455	Protein-RNA-Chromatin Interactions Reveal Nuclear RNA Architecture Functions in Transcriptional Condensation and Chromatin Folding	Genome binding/occupancy profiling by high throughput sequencing Other	Drosophila melanogaster	22	BED BEDGRAPH TXT SRA Run Selector	Zhongyuan Tian	Nov 30, 2021