NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Series GSE202042 Query DataSets for GSE202042
Status Public on Jun 22, 2024
Title High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks
Organisms Drosophila melanogaster; Homo sapiens; Mus musculus
Experiment type Genome binding/occupancy profiling by high throughput sequencing
Other
Summary This SuperSeries is composed of the SubSeries listed below.
 
Overall design Refer to individual Series
Web link https://doi.org/10.1101/2022.05.21.492925
 
Citation missing Has this study been published? Please login to update or notify GEO.
Submission date May 02, 2022
Last update date Sep 29, 2024
Contact name Maximilian Christian von der Linde
E-mail(s) maximilian.linde@imp.ac.at, max_vdl@outlook.com
Phone +4368181646556
Organization name Institute of Molecular Pathology
Lab Pavri GRP
Street address Campus-vienna-biocenter 1, IMP, Pavri GRP
City Vienna
State/province Vienna
ZIP/Postal code 1030
Country Austria
 
Platforms (9)
GPL15520 Illumina MiSeq (Homo sapiens)
GPL16417 Illumina MiSeq (Mus musculus)
GPL16791 Illumina HiSeq 2500 (Homo sapiens)
Samples (78)
GSM6090024 Ramos_ATAC_merge
GSM6090025 Ramos_AIDKO_D3_K27Ac
GSM6090026 Ramos_AIDKO_D3_K4me3
This SuperSeries is composed of the following SubSeries:
GSE202037 High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks [ATAC-seq]
GSE202038 High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks [ChIP-seq]
GSE202039 High-resolution transcriptional analysis of immunoglobulin variable regions reveals the absence of direct relationships between somatic hypermutation, nascent transcription and epigenetic marks [MutPE]
Relations
BioProject PRJNA834071

Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp
Series Matrix File(s) TXTHelp

Supplementary file Size Download File type/resource
GSE202042_RAW.tar 9.1 Mb (http)(custom) TAR (of BEDGRAPH, BW)
SRA Run SelectorHelp

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap