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59 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Genome binding/occupancy profiling by high throughput sequencing			COV
GSE247620	Histone methyltransferase SETDB1 silenced SINE B2 retrotransposons and maintained mitotic cell cycle of neural progenitor cells	Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	22	COV HIC NARROWPEAK	Yan Jiang	Jun 01, 2024
GSE249016	Epigenetic profiling in adult brain after prenatal BPA exposure	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	45	BW COV TXT	Yan Jiang	May 29, 2024
GSE263341	ChIP-seq, RNA-seq and BS-seq for WT and osino80	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Oryza sativa Japonica Group	75	BIGWIG BW COV	Wenhao Xie	Apr 10, 2024
GSE244520	DNMT3B PWWP mutations cause hypermethylation of heterochromatin.	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Homo sapiens	80	BIGWIG COV TXT	Duncan Sproul	Jan 22, 2024
GSE153331	Astrocyte Reactivity and Cognitive Decline Follow Chronic Heterochromatin Loss in Neurons	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	71	BEDGRAPH BW COV CSV RDS TXT SRA Run Selector	Andrew Newman	Jan 10, 2024
GSE244698	Gestational diabetes in mice induces hematopoietic memory that impacts the long-term health of the offspring	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	20	BED COV TXT	Reynaud Damien	Nov 13, 2023
GSE246426	ETV4-Dependent Transcriptional Plasticity Maintains MYC Expression and Results in IMiD Resistance in Multiple Myeloma [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	16	BW COV TXT	Benjamin G Barwick	Oct 30, 2023
GSE218512	Epigenetic dynamics during capacitation of naïve human pluripotent stem cells	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	122	COV	Laura Biggins	Oct 03, 2023
GSE242358	MoTrPAC: Endurance Exercise Training Study In 6 Months Old Rats	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Rattus norvegicus	1747	COV TXT	Euan Ashley	Sep 30, 2023
GSE243978	Transcriptional heterogeneity overcomes super-enhancer disrupting drug combinations in multiple myeloma [ATAC-seq]	Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens	8	BW COV TXT	Benjamin G Barwick	Sep 25, 2023
GSE195556	An engineered Sox17 induces somatic to neural stem cell fate transition independently from pluripotency reprogramming	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	140	COV MTX TSV	Mingxi WENG	Jul 19, 2023
GSE228707	Bisulfite-free base-resolution sequencing of oxidized cytosines (APOBEC-seq) reveals a ubiquitous role of thymine DNA glycosylase in active gene promoters and an interaction with MBD3/NuRD	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	55	COV NARROWPEAK	Moshe Szyf	Jun 30, 2023
GSE234658	Decitabine disrupts EBV genomic epiallele DNA methylation patterns around CTCF binding sites to increase chromatin accessibility and lytic transcription in gastric cancer	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	human gammaherpesvirus 4	16	BW COV	Sarah Alp	Jun 14, 2023
GSE231406	IRF8 configures enhancer landscape in postnatal microglia and directs microglia specific transcriptional programs	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	COV MTX TAB TSV TXT	Keita Saeki	Jun 01, 2023
GSE186260	The chemical reprogramming of unipotent adult germ cells towards authentic pluripotency and de novo establishment of imprinting	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	145	COV CSV TXT XLSX SRA Run Selector	Jiansen Lu	Feb 07, 2023
GSE224563	DNA methylation in the mouse cochlea promotes maturation of supporting cells and contributes to the failure of hair cell regeneration	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	52	BED BW COV H5 H5SEURAT MTX RDS TSV	John Duc Nguyen	Feb 07, 2023
GSE222612	Pan-cancer analysis revealed H3K4me1 at bivalent promoters premarks DNA hypermethylation during tumor development and identified the regulatory role of DNA methylation in relation to histone modifications	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Homo sapiens	28	BW COV	Cao Qiang	Jan 11, 2023
GSE191026	GLP is critical for oogenesis exhibiting a G9A-independent role in transcriptional repression	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	40	COV TXT	Felix Krueger	Dec 02, 2022
GSE210804	scNMT-seq of pancreatic organoids - DNA methylation and chromatin accessibility	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Mus musculus	179	COV	Ana Martin-Villalba	Aug 12, 2022
GSE210806	Single-cell triple-omics uncovers DNA methylation as key feature of stemness in the healthy and ischemic adult brain	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	4532	BEDGRAPH COV	Ana Martin-Villalba	Aug 12, 2022