GEO Browser - GEO

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45 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter		Methylation profiling by high throughput sequencing	Mus musculus		NARROWPEAK
GSE247620	Histone methyltransferase SETDB1 silenced SINE B2 retrotransposons and maintained mitotic cell cycle of neural progenitor cells	Genome binding/occupancy profiling by high throughput sequencing Other Methylation profiling by high throughput sequencing	Mus musculus	22	COV HIC NARROWPEAK	Yan Jiang	Jun 01, 2024
GSE208742	Direct neuronal reprogramming of mouse astrocytes is associated with multiscale epigenome remodeling and requires Yy1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	64	BED BEDGRAPH BW MTX NARROWPEAK TAB TSV TXT XLSX SRA Run Selector	Boyan Bonev	Apr 30, 2024
GSE247320	Histone methyltransferase Ezh2 coordinates mammalian axon regeneration via regulation of key regenerative pathways	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	38	BB NARROWPEAK	Xuewei Wang	Dec 22, 2023
GSE240413	Brain methylome remodeling sustains neuronal activity gene expression in mice exposed to maternal immune activation [5mC]	Methylation profiling by high throughput sequencing	Mus musculus	16	NARROWPEAK	Bing Yao	Oct 25, 2023
GSE240415	Brain methylome remodeling sustains neuronal activity gene expression in mice exposed to maternal immune activation [5hmc]	Methylation profiling by high throughput sequencing	Mus musculus	16	NARROWPEAK	Bing Yao	Oct 25, 2023
GSE240417	Brain methylome remodeling sustains neuronal activity gene expression in mice exposed to maternal immune activation	Methylation profiling by high throughput sequencing	Mus musculus	32	NARROWPEAK	Bing Yao	Oct 25, 2023
GSE226043	Role of TET1-mediated epigenetic modulation in Alzheimer’s disease [5hmC-Capture]	Methylation profiling by high throughput sequencing	Mus musculus	13	NARROWPEAK	Matthew J Armstrong	Oct 03, 2023
GSE208695	Chromatin regulation of transcriptional enhancers and cell fate by the Sotos syndrome gene NSD1	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Mus musculus	199	BIGWIG BW NARROWPEAK TAB	Zhen Sun	Jul 03, 2023
GSE228707	Bisulfite-free base-resolution sequencing of oxidized cytosines (APOBEC-seq) reveals a ubiquitous role of thymine DNA glycosylase in active gene promoters and an interaction with MBD3/NuRD	Methylation profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Homo sapiens Mus musculus	55	COV NARROWPEAK	Moshe Szyf	Jun 30, 2023
GSE223299	Stressing Out Epigenetics: A Profile of the Global Effects of Stress on DNA Modifications in the Brain (ChIP-Seq)	Methylation profiling by high throughput sequencing	Mus musculus	46	NARROWPEAK	Bing Yao	May 19, 2023
GSE223301	Stressing Out Epigenetics: A Profile of the Global Effects of Stress on DNA Modifications in the Brain	Methylation profiling by high throughput sequencing Expression profiling by high throughput sequencing	Mus musculus	68	NARROWPEAK	Bing Yao	May 19, 2023
GSE206384	YTHDF2 inhibition potentiates radiotherapy by reprogramming suppressive myeloid cells [MeRIP-Seq]	Methylation profiling by high throughput sequencing	Mus musculus	24	NARROWPEAK TXT	Chuan He	Apr 28, 2023
GSE206387	YTHDF2 inhibition potentiates radiotherapy by reprogramming suppressive myeloid cells	Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	46	MTX NARROWPEAK TSV TXT	Chuan He	Apr 28, 2023
GSE214845	Dual gene activating and repressive functions of TET1 in germ layer lineage bifurcation distinguished by genomic context and dependence on 5-methylcytosine oxidation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	150	BIGWIG BW MTX NARROWPEAK RDS TSV TXT	Bernard Klaas van der Veer	Apr 12, 2023
GSE168415	DNMT3B supports meso-endoderm differentiation from mouse embryonic stem cells	Genome binding/occupancy profiling by high throughput sequencing Expression profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	1606	BW NARROWPEAK	Andrea Lauria	Jan 23, 2023
GSE211521	Global m6A-modified mRNAs in the uterus of wild-type mouse	Methylation profiling by high throughput sequencing Other	Mus musculus	2	NARROWPEAK	Ji-Long Liu	Nov 18, 2022
GSE178628	Hypoxia induces an early primitive streak signature, enhancing spontaneous elongation and lineage representation in gastruloids	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	27	MTX NARROWPEAK TSV	Natalia Lopez-Anguita	Aug 24, 2022
GSE198458	Modeling methyl-sensitive transcription factor motifs with an expanded epigenetic alphabet	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	8	NARROWPEAK	Michael M. Hoffman	Aug 16, 2022
GSE200062	A SOX2 engineered epigenetic silencer factor represses the glioblastoma genetic program	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing Other	Homo sapiens Mus musculus	41	BED NARROWPEAK TSV	Luca Massimino	Aug 10, 2022
GSE192875	Transcriptional regulation of the thymus master regulator Foxn1	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Mus musculus	72	BROADPEAK BW NARROWPEAK	Jakub Abramson	Aug 03, 2022