GEO Browser - GEO

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28 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Nematostella vectensis		SRA Run Selector
GSE173786	Spatial transcriptomics reveals a conserved segment polarity program that governs muscle patterning in Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	31	CSV H5 SRA Run Selector	Shiyuan (Cynthia) Chen	Jun 12, 2023
GSE154476	Sea anemone mesentery muscle profiling [bulk RNA-seq]	Expression profiling by high throughput sequencing	Nematostella vectensis	4	TXT SRA Run Selector	Alison G Cole	Dec 31, 2022
GSE182573	An ancestral Wnt-Brachyury feedback loop and vertebrate-specific recruitment of mesoderm-determining target genes revealed by comparative Brachyury target screens	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Nematostella vectensis	17	BED TXT SRA Run Selector	Rohit Anil Dnyansagar	Nov 30, 2022
GSE154105	Sea anemone single cell tissue profiling [scRNA-seq]	Expression profiling by high throughput sequencing	Nematostella vectensis	4	MTX TSV SRA Run Selector	Alison G Cole	Sep 09, 2022
GSE168938	Microbiome mediated plasticity promotes thermal adaptation in Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	15	GFF3 TXT SRA Run Selector	Sebastian Fraune	Feb 04, 2022
GSE159166	Spatial transcriptome of Nematostella vectensis apical organ reveals its molecular signature and associated cells	Expression profiling by high throughput sequencing	Nematostella vectensis	10	TXT SRA Run Selector	vengamanaidu modepalli	Oct 01, 2021
GSE175984	Cyclic dinucleotide stimulation of Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	33	TXT SRA Run Selector	Shally Rebecca Margolis	Jun 03, 2021
GSE166977	ACME dissociation: a versatile cell fixation-dissociation method for single-cell transcriptomics	Expression profiling by high throughput sequencing	Nematostella vectensis	1	RDS SRA Run Selector	Arnau Sebe-Pedros	Apr 01, 2021
GSE167114	Impact of antibiotics, cell-free supernatant, LPS, and live cells on Nematostella vectensis gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	76	TXT SRA Run Selector	Adam Reitzel	Feb 20, 2021
GSE144203	Unravelling the developmental and functional significance of an ancient Argonaute duplication	Non-coding RNA profiling by high throughput sequencing Expression profiling by high throughput sequencing	Nematostella vectensis	30	XLSX SRA Run Selector	Arie Fridrich	Oct 13, 2020
GSE144104	Geographical temperature stress in the sea anemone Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	52	TXT SRA Run Selector	Whitney at Leach	Jan 24, 2020
GSE144080	Gene expression during recovery from different forms of trauma in the sea anemone, Nematostella vectensis	Expression profiling by high throughput sequencing	Nematostella vectensis	84	TXT SRA Run Selector	Whitney at Leach	Jan 23, 2020
GSE143861	Global temporal gene expression of Nematostella vectensis in-situ	Expression profiling by high throughput sequencing	Nematostella vectensis	66	TXT SRA Run Selector	Whitney at Leach	Jan 18, 2020
GSE73545	The evolution of DNA methylation inheritance and programming in animals	Methylation profiling by high throughput sequencing	Apis mellifera Ciona savignyi Nematostella vectensis Strongylocentrotus purpuratus	22	BED SRA Run Selector	jiang liu	Nov 17, 2019
GSE135498	Sequencing short capped RNAs captures acute transcription initiation and identifies promoter and distal regulatory elements across eukaryotes from total RNA	Other	Capsaspora owczarzaki Homo sapiens Mus musculus Nematostella vectensis Neurospora crassa Oryza sativa	40	BIGWIG BW TXT SRA Run Selector	Christopher Benner	Sep 16, 2019
GSE124016	Convergent evolution of a vertebrate-like methylome in a marine sponge	Genome binding/occupancy profiling by high throughput sequencing Methylation profiling by high throughput sequencing	Amphimedon queenslandica Mnemiopsis leidyi Nematostella vectensis Sycon ciliatum	36	CGMAP TXT SRA Run Selector	Alex de Mendoza	Aug 02, 2019
GSE132526	Decoupling behavioral and transcriptional responses to color in an eyeless cnidarian	Expression profiling by high throughput sequencing	Nematostella vectensis	96	TXT SRA Run Selector	Whitney at Leach	Jun 12, 2019
GSE132202	Transcriptional remodeling upon light removal in a model cnidarian: losses and gains in gene expression	Expression profiling by high throughput sequencing	Nematostella vectensis	136	TXT SRA Run Selector	Whitney at Leach	Jun 06, 2019
GSE110148	The methyltransferase HEN1 is required in Nematostella vectensis for microRNA and piRNA stability as well as larval metamorphosis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	8	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019
GSE115184	The methyltransferase HEN1 is required for microRNA and piRNA stability as well as larval metamorphosis in Nematostella vectensis	Non-coding RNA profiling by high throughput sequencing	Nematostella vectensis	12	TXT SRA Run Selector	vengamanaidu modepalli	Jan 01, 2019