GEO Browser - GEO

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80 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Bombyx mori
GSE228397	Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori [ChIP-seq]	Genome binding/occupancy profiling by high throughput sequencing	Bombyx mori	20	BIGWIG	Héloïse Muller	Sep 17, 2023
GSE228398	Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori [RNA-seq]	Expression profiling by high throughput sequencing	Bombyx mori	3	BW XLSX	Héloïse Muller	Sep 17, 2023
GSE228399	Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori [Hi-C head]	Other	Bombyx mori	1	MCOOL	Héloïse Muller	Sep 17, 2023
GSE228400	Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori [Hi-C embryo]	Other	Bombyx mori	3	MCOOL	Héloïse Muller	Sep 17, 2023
GSE228401	Unique territorial and sub-chromosomal organization revealed in the holocentric moth Bombyx mori	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing Other	Bombyx mori	27	BIGWIG BW MCOOL	Héloïse Muller	Sep 17, 2023
GSE242203	Mechanism of Hyperproteinemia-Induced Damage to Female Reproduction in a Genetic Silkworm Model	Expression profiling by high throughput sequencing	Bombyx mori	12	TXT	Guihua Jiang	Sep 06, 2023
GSE239380	Identification of genes associated with the development of silk glands using transcriptomics in silkworm (Bombyx mori)	Expression profiling by high throughput sequencing	Bombyx mori	9	TXT	Sun Lindan	Aug 02, 2023
GSE226783	RNA secondary structome of different retrotransposons with DNA/protein binding	Other	Bombyx mori	9	TXT	Lei Sun	May 11, 2023
GSE213914	Bombyx Vasa sequesters transposon mRNAs in nuage via phase separation requiring RNA binding and self-association [RIP-Seq]	Expression profiling by high throughput sequencing	Bombyx mori	4	TXT	Yurika Namba	Mar 06, 2023
GSE213915	Bombyx Vasa sequesters transposon mRNAs in nuage via phase separation requiring RNA binding and self-association [RNA-Seq]	Expression profiling by high throughput sequencing	Bombyx mori	4	TXT	Yurika Namba	Mar 06, 2023
GSE213917	Bombyx Vasa sequesters transposon mRNAs in nuage via phase separation requiring RNA binding and self-association	Expression profiling by high throughput sequencing	Bombyx mori	8		Yurika Namba	Mar 06, 2023
GSE205498	Transcriptomic evolution across bilaterian tissues	Expression profiling by high throughput sequencing	Aedes aegypti Blattella germanica Bombyx mori Branchiostoma lanceolatum Callorhinchus milii Cloeon dipterum Danio rerio Drosophila melanogaster Episyrphus balteatus Monodelphis domestica Octopus bimaculoides Strigamia maritima Strongylocentrotus purpuratus Tribolium castaneum Xenopus tropicalis	89	TSV	Federica Mantica	Oct 12, 2022
GSE184152	Global profiling of genes expressed in silk glands of Philippine-reared mulberry silkworm (Bombyx mori)	Expression profiling by high throughput sequencing	Bombyx mori	9	CSV TXT SRA Run Selector	Ma. Anita Bautista	Jul 31, 2022
GSE193279	A single-cell transcriptomic atlas characterizes the silk-producing organ in the silkworm	Expression profiling by high throughput sequencing	Bombyx mori	3	MTX TSV	Hanfu Xu	May 06, 2022
GSE180191	Maelstrom functions in the production of Siwi-piRISC capable of regulating transposons in Bombyx germ cells	Expression profiling by high throughput sequencing Other	Bombyx mori	12	FASTA TXT SRA Run Selector	Yurika Namba	Mar 02, 2022
GSE191164	Dosage compensation in Bombyx mori is achieved by partial repression of both Z chromosomes in males	Genome binding/occupancy profiling by high throughput sequencing	Bombyx mori	12	BW	Dahong Chen	Feb 05, 2022
GSE179432	Siwi cooperates with Par-1 kinase to regulate mitochondrial Papi scaffolding Siwi-piRISC biogenesis	Non-coding RNA profiling by high throughput sequencing	Bombyx mori	6	TXT SRA Run Selector	Yuka W. Iwasaki	Jan 25, 2022
GSE191033	Comparative analysis of testis transcriptome between a genetic male sterile line (GMS) and its wild-type 898WB in silkworm, Bombyx mori	Expression profiling by high throughput sequencing	Bombyx mori	6	TXT	Xinglin Mei	Dec 17, 2021
GSE173672	Differentially expressed genes (DEGs) in oviducts of Yun7 and its giant egg mutant Yun7Ge of silkworm, Bombyx mori	Expression profiling by high throughput sequencing	Bombyx mori	4	TXT SRA Run Selector	Anli Chen	May 01, 2021
GSE146873	RNA m6A methylation of 3ʹ splice site prevents binding of U2AF35 to inhibit splicing	Expression profiling by high throughput sequencing	Bombyx mori Caenorhabditis elegans Mus musculus	42	BW CSV XLSX SRA Run Selector	Ramesh Pillai	Apr 29, 2021