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315 series

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Accession	Title	Series type(s)	Organism(s)	Samples	Supplementary	Contact	Release date
Filter			Xenopus laevis
GSE22147	microRNAs-449 control vertebrate multi-ciliogenesis by repressing Notch signalling	Non-coding RNA profiling by array Expression profiling by array Non-coding RNA profiling by high throughput sequencing	Homo sapiens Xenopus laevis	64	CEL TXT	Kevin Lebrigand	Jun 07, 2011
GSE22146	microRNAs signatures of Xenopus laevis embryo epidermis at stage 11 (non ciliated) and 26 (ciliated) using high throughput sequencing	Non-coding RNA profiling by high throughput sequencing	Xenopus laevis	4	XLS SRA Run Selector	Kevin Lebrigand	Jun 07, 2011
GSE35606	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells (miRNA)	Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	4	GPR	Janet M. Young	Apr 02, 2012
GSE35921	miR-206 integrates multiple components of differentiation pathways to control the transition from growth to differentiation in rhabdomyosarcoma cells	Expression profiling by array Non-coding RNA profiling by array	Anopheles gambiae Apis mellifera Arabidopsis thaliana Ateles geoffroyi Betapolyomavirus macacae Bombyx mori Bos taurus Caenorhabditis briggsae Caenorhabditis elegans Canis lupus familiaris Danio rerio Drosophila melanogaster Drosophila pseudoobscura Gallid alphaherpesvirus 2 Gallus gallus Glycine max Gorilla gorilla Homo sapiens Human betaherpesvirus 5 Human gammaherpesvirus 8 Lagothrix lagotricha Lemur catta Macaca mulatta Macaca nemestrina Macacine gammaherpesvirus 4 Medicago truncatula Monodelphis domestica Murid gammaherpesvirus 4 Mus musculus Oryza sativa Ovis aries Pan paniscus Pan troglodytes Physcomitrium patens Pongo pygmaeus Populus trichocarpa Rattus norvegicus Saccharum officinarum Saguinus labiatus Schmidtea mediterranea Sorghum bicolor Sus scrofa Takifugu rubripes Tetraodon nigroviridis Xenopus laevis Xenopus tropicalis Zea mays human gammaherpesvirus 4	16	GPR	Janet M. Young	Apr 02, 2012
GSE86883	miR-182 regulates Slit2-mediated axon guidance by modulating the local translation of a specific mRNA	Non-coding RNA profiling by high throughput sequencing	Xenopus laevis	2	FA SRA Run Selector	Cei Abreu-Goodger	Jan 23, 2017
GSE33444	miR-124 acts through coREST to control the onset of Sema3A sensitivity in navigating retinal growth cones	Non-coding RNA profiling by high throughput sequencing	Xenopus laevis	9	FA TXT SRA Run Selector	Cei Abreu-Goodger	Dec 12, 2011
GSE28390	[E-MTAB-369] Transcription profiling by array of Xenopus laevis embryos at 15 different stages	Expression profiling by array	Xenopus laevis	30	CEL	Naoki Irie	Apr 05, 2011
GSE51562	Zygotic expression of Exostosin1 (Ext1) is required for establishment of dorsal-ventral pattern in Xenopus	Expression profiling by array	Xenopus laevis	6	CEL	Amy of Sater	Oct 23, 2013
GSE224304	Xenopus laevis lack the critical sperm factor PLCz	Expression profiling by high throughput sequencing	Xenopus laevis	3	TXT	Joel C Rosenbaum	Feb 06, 2023
GSE47578	Xenopus laevis embryos and animal caps: Control vs PouV morpholino	Expression profiling by array	Xenopus laevis	16	TXT	Joshua Brickman	Nov 12, 2013
GSE118382	Xenopus hybrids provide insight into cell and organism size control	Expression profiling by high throughput sequencing	Xenopus laevis Xenopus tropicalis Xenopus tropicalis x Xenopus laevis	8	FA TXT SRA Run Selector	Taejoon Kwon	Dec 19, 2018
GSE7129	Xenopus cDNA microarray identification of genes with endodermal organ expression	Expression profiling by array	Xenopus laevis	3	TXT	JIN-KWAN HAN	Mar 31, 2007
GSE63228	Xenopus Piwi protein associated transcripts indicate regulation beyond transposons	Expression profiling by high throughput sequencing Other Non-coding RNA profiling by high throughput sequencing	Xenopus laevis Xenopus tropicalis	11	TXT SRA Run Selector	NELSON LAU	Nov 10, 2015
GSE77365	Wnt/β-catenin in Xenopus laevis gastrulation	Expression profiling by high throughput sequencing Genome binding/occupancy profiling by high throughput sequencing	Xenopus laevis	12	BED TXT	Richard Harland	Apr 25, 2016
GSE127777	Whole transcriptome bisufilte sequencing for multiple species [Xenopus laevis]	Methylation profiling by high throughput sequencing	Xenopus laevis	4	CSV SRA Run Selector	Rui Zhang	Feb 27, 2022
GSE127780	Whole transcriptome bisufilte sequencing for multiple species	Methylation profiling by high throughput sequencing	Danio rerio Drosophila melanogaster Homo sapiens Mus musculus Xenopus laevis Xenopus tropicalis	67	CSV	Rui Zhang	Feb 27, 2022
GSE77724	Translational profiling of retinal ganglion cell optic nerve regeneration in Xenopus laevis	Expression profiling by high throughput sequencing	Xenopus laevis	12	CSV SRA Run Selector	Gregg Brooks Whitworth	Nov 01, 2016
GSE226434	Transcriptomic analyses identify pathways linking developmental atrazine exposure to altered intestine development	Expression profiling by high throughput sequencing	Xenopus laevis	8	CSV	Dereje D. Jima	Feb 01, 2024
GSE74470	Transcriptomic Insights into Genetic Diversity of Protein-Coding Genes in X. laevis	Expression profiling by high throughput sequencing	Xenopus laevis	3	TSV TXT VCF SRA Run Selector	Leonid Peshkin	Mar 15, 2017
GSE8293	Transcriptomic Analysis of the Effects of Cyclopamine Exposure on Xenopus Limb Development	Expression profiling by array	Xenopus laevis	8	CEL	Geffrey Foresman Stopper	Jun 14, 2008