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Status
Public on Feb 01, 2011
Title
Fusarium graminearum 4x44k
Technology type
spotted oligonucleotide
Distribution
custom-commercial
Organism
Fusarium graminearum Manufacturer
Agilent Technologies
Manufacture protocol
SurePrint technology: Custom commercial microarrays are manufactured using a non-contact industrial inkjet printing process, in which oligo monomers are deposited uniformly onto specially-prepared glass slides. This in situ synthesis process prints 60-mer length oligonucleotide probes, base-by-base, from digital sequence files. The precise inkjet process enables the delivery of extremely small, accurate volumes (picoliters) of the chemicals to be spotted. Standard phosphoramidite chemistry used in the reactions allows for very high coupling efficiencies to be maintained at each step in the synthesis of the full-length oligonucleotide. Precise quantities are reproducibly deposited “on the fly” and is achieved without stopping, to make contact with the slide surface and without introducing surface-contact feature anomalies.
Submission date
Oct 12, 2010
Last update date
May 08, 2019
Contact name
Linda J Harris
E-mail(s)
Linda.Harris@agr.gc.ca Phone
613-759-1314
Organization name
Agriculture & Agri-Food Canada (AAFC)
Department
Eastern Cereal & Oilseed Research Centre
Lab
Building #21
Street address
960 Carling Ave.
City
Ottawa
State/province
Ontario
ZIP/Postal code
K1A 0C6
Country
Canada
Samples (88)
GSM607560 , GSM607561 , GSM607562 , GSM607563 , GSM607564 , GSM607565
GSM607566 ,
GSM607567 ,
GSM607568 ,
GSM607569 ,
GSM607570 ,
GSM607571 ,
GSM766153 ,
GSM766154 ,
GSM766155 ,
GSM766156 ,
GSM766157 ,
GSM766158 ,
GSM929368 ,
GSM929369 ,
GSM929370 ,
GSM929371 ,
GSM929372 ,
GSM929373 ,
GSM929374 ,
GSM929375 ,
GSM929376 ,
GSM929377 ,
GSM929378 ,
GSM929379 ,
GSM929380 ,
GSM929381 ,
GSM929382 ,
GSM929383 ,
GSM929384 ,
GSM929385 ,
GSM929386 ,
GSM929387 ,
GSM929388 ,
GSM929389 ,
GSM929390 ,
GSM929391 ,
GSM929392 ,
GSM929393 ,
GSM929394 ,
GSM929395 ,
GSM929396 ,
GSM929397 ,
GSM929398 ,
GSM929399 ,
GSM929400 ,
GSM929401 ,
GSM929402 ,
GSM929403 ,
GSM929404 ,
GSM929405 ,
GSM929406 ,
GSM929407 ,
GSM929408 ,
GSM929409 ,
GSM929410 ,
GSM929411 ,
GSM929412 ,
GSM929413 ,
GSM929414 ,
GSM929415 ,
GSM929416 ,
GSM929417 ,
GSM929418 ,
GSM929419 ,
GSM2677790 ,
GSM2677791 ,
GSM2677792 ,
GSM2677793 ,
GSM2677794 ,
GSM2677795 ,
GSM2677796 ,
GSM2677797 ,
GSM2677798 ,
GSM2677799 ,
GSM2677800 ,
GSM2677801 ,
GSM2677802 ,
GSM2677803 ,
GSM2677804 ,
GSM2677805 ,
GSM2677806 ,
GSM2677807 Series (4)
GSE24636 Effect of salicylic acid on Fusarium graminearum, the major causal agent of fusarium head blight in wheat
GSE30892 Tri6 is a global transcription regulator in the phytopathogen Fusarium graminearum
GSE37886 Transcriptional profiling of the plant pathogen Fusarium graminearum on three cereal hosts.
GSE100318 Effect of L-tryptophan, tryptamine and indole-3 acetaldehyde on gene expression in Fusarium graminearum
Relations Alternative to
GPL26641
Data table header descriptions ID description Block Column Row Oligo id all oligos IDs designed to represent Fusarium graminearum ORFs begin with CUST - all other oligos are controls/spiking controls.
ORF SPOT_ID
Data table ID description Block Column Row Oligo id ORF SPOT_ID 1
DarkCorner
1
1
1
DarkCorner
--DarkCorner
2
GE_BrightCorner
1
1
1
GE_BrightCorner
--GE_BrightCorner
3
(-)3xSLv1
1
2
1
(-)3xSLv1
--(-)3xSLv1
4
(+)E1A_r60_a135
1
4
1
(+)E1A_r60_a135
--(+)E1A_r60_a135
5
fg07601
1
20
1
CUST_32073_PI390790352
fg07601 6
fg10751
1
21
1
CUST_26002_PI390790352
fg10751 7
fg03529
1
22
1
CUST_27280_PI390790352
fg03529 8
fg10661
1
23
1
CUST_27775_PI390790352
fg10661 9
fg12865
1
24
1
CUST_4998_PI390790352
fg12865 10
fg06470
1
25
1
CUST_530_PI390790352
fg06470 11
fg00397
1
26
1
CUST_14124_PI390790352
fg00397 12
fg04836
1
27
1
CUST_12814_PI390790352
fg04836 13
fg01687
1
27
1
CUST_142_PI390790352
fg01687 14
fg07701
1
28
1
CUST_30537_PI390790352
fg07701 15
fgd267-160
1
29
1
CUST_169_PI390790352
fgd267-160 16
fg03279
1
30
1
CUST_31876_PI390790352
fg03279 17
fg05939
1
31
1
CUST_1376_PI390790352
fg05939 18
fg00387
1
32
1
CUST_14206_PI390790352
fg00387 19
fg08359
1
33
1
CUST_27772_PI390790352
fg08359 20
fg06327
1
34
1
CUST_2039_PI390790352
fg06327
41448 2231 Kbytes .Supplementary file Size Download File type/resource GPL11046_Custom_Agilent_4X44K_Fusarium_graminearum_LH_01_sequences.txt.gz
915.6 Kb
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